Issues
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Cover Image
Cover Image
ON THE COVER
Wide-field image of a node of Ranvier in a myelinated axon stained for ADAM23 (green), βIV Spectrin (red; the node) and CASPR (gray; the paranode). ADAM23 is present in the juxtaparanodal axonal domain and engages with its ligands LGI3 and LGI2 to direct accumulation and stability of Kv1 channel complexes in the juxtaparanode to regulate the refractory period of the myelinated axon. Image © Kozar-Gillan et al., 2023 https://doi.org/10.1083/jcb.202211031 - PDF Icon PDF LinkTable of Contents
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People & Ideas
Yogesh Kulathu: Decoding complex intracellular messages
Yogesh Kulathu studies signaling mechanisms with a focus on ubiquitin and other post-translational modifications such as UFMylation.
Spotlights
Cappin’ or formin’: Formin and capping protein competition for filament ends shapes actin networks
Vladimir Sirotkin previews work from Wirshing and colleagues, which examines how competition between formins and capping proteins for the barbed ends of actin filaments modulates actin networks.
ARF3 weights the balance for prostate cancer metastasis
Patrick T. Caswell discusses work from Bryant and colleagues which shows how ARF3 impacts metastasis in prostate cancer by regulating a switch between modes of collective invasion.
Open Thy Lattice Osteoclast, Resorb me!
Bakiri previews work from the Weiss lab identifying a new, unexpected role for MMP9/14 in supporting osteoclast function through a galectin-3/Lrp1 axis.
Fine-tune TMEM11 to unleash basal mitophagy
Thomas McWilliams discusses work by Gok et al. which reveals that TMEM11 localizes to the outer mitochondrial membrane where it regulates BNIP3/BNIP3L-dependent receptor-mediated mitophagy.
Reviews
Quality control ensures fidelity in ribosome assembly and cellular health
Melissa Parker and Katrin Karbstein review our current understanding of the quality control mechanisms governing ribosome assembly.
Reports
Nanoscale structural organization and stoichiometry of the budding yeast kinetochore
Cieslinski and Wu et al. employ super-resolution microscopy to obtain a comprehensive model of the kinetochore structure in budding yeast. By measuring precise positions and stoichiometries, they could resolve the arrangement of the major kinetochore subunits when under attachment tension during metaphase.
Unraveling the kinetochore nanostructure in Schizosaccharomyces pombe using multi-color SMLM imaging
Virant et al. build an in situ model of the Schizosaccharomyces pombe kinetochore by determining inter-protein distances and copy numbers. Next to confirming its conserved nature known from in vitro data, they point out S. pombe specifics, e.g., within DASHc and the inner kinetochore structure.
Articles
Tex2 is required for lysosomal functions at TMEM55-dependent ER membrane contact sites
Du et al. show that Tex2, a potential lipid transporter on the tubular endoplasmic reticulum, is recruited to late endosomes/lysosomes by endosome-resident phosphatidylinositol 4-phosphatases TMEM55 to regulate the lipid compositions, trafficking, and the functions of lysosomes.
An interaction between β′-COP and the ArfGAP, Glo3, maintains post-Golgi cargo recycling
Xie et al. demonstrate how an acidic patch in the β′-COP subunit of the yeast COPI coat serves as a critical recognition site for binding conserved basic residues in the ArfGAP, Glo3. Loss of this COPI/Glo3 molecular link affects recycling of specific transmembrane proteins trafficked through endosomes and the TGN.
The outer mitochondrial membrane protein TMEM11 demarcates spatially restricted BNIP3/BNIP3L-mediated mitophagy
Gok et al. describe a role for the mitochondrial outer membrane protein TMEM11 in the spatial regulation of receptor-mediated mitophagy. Upon mitophagy induction, TMEM11 co-enriches with BNIP3 and BNIP3L at mitophagy sites. However, in the absence of TMEM11, mitophagy sites are dysregulated and drastically increase in number along the mitochondrial membrane.
The p97/VCP segregase is essential for arsenic-induced degradation of PML and PML-RARA
Jaffray et al. demonstrate that the arsenic-induced, SUMO and ubiquitin-mediated degradation of the PML protein and its oncogenic variant PML-RARA is dependent upon the VCP/p97 segregase protein.
Human atlastins are sufficient to drive the fusion of liposomes with a physiological lipid composition
Atlastins regulate the structure and function of the endoplasmic reticulum (ER). In this study, using reconstituted proteoliposomes with a lipid composition mimicking that of the ER, Jang et al. show that all human atlastins are sufficient to drive membrane fusion.
Evolutionary tuning of barbed end competition allows simultaneous construction of architecturally distinct actin structures
Competition at barbed ends between capping proteins and formins leads to the assembly of architecturally distinct cellular actin structures and the differential sorting of actin-binding proteins to each structure.
Antagonism between Prdm16 and Smad4 specifies the trajectory and progression of pancreatic cancer
Pancreatic ductal adenocarcinoma (PDAC) is a deadly disease whose molecular etiology remains mostly enigmatic. By discovering an antagonistic relationship between the tumor suppressors Prdm16 and Smad4 in PDAC, this study paves the way for innovative frameworks with potential therapeutic implications.
Proteolytic regulation of a galectin-3/Lrp1 axis controls osteoclast-mediated bone resorption
Zhu et al. identify a critical role for a heretofore undescribed interaction between a dual set of metalloproteins, Mmp9 and Mmp14, and the carbohydrate-binding protein galectin-3, whose binding interaction with the transmembrane receptor Lrp-1 shapes the transcriptional programs and signaling cascades directing osteoclast-mediated bone resorption.
Dynamin2 functions as an accessory protein to reduce the rate of caveola internalization
Larsson et al. demonstrate that the large GTPase dynamin 2 does not mediate fission of caveolae from the plasma membrane as previously thought. Instead, dynamin 2 associates with a subset of caveolae and functions to restrain caveolae to the plasma membrane via a GTPase-independent mechanism.
CSPP1 stabilizes growing microtubule ends and damaged lattices from the luminal side
Van den Berg et al. provide insight into the biochemical mechanisms of the assembly and maintenance of stable microtubule structures in the cilia by dissecting how the ciliopathy-linked protein CSPP1 stabilizes microtubules from the inside.
Septin-mediated RhoA activation engages the exocyst complex to recruit the cilium transition zone
Safavian et al. show that septins and the associated RhoA GTP exchange factor ARHGEF18 regulate primary ciliogenesis by locally activating RhoA, leading to the activation of the exocyst complex and the subsequent recruitment of transition zone components.
Hepatocyte apical bulkheads provide a mechanical means to oppose bile pressure
Bebelman and Bovyn et al. demonstrate that apical bulkheads, connections between the apical membranes of opposing hepatocytes, are load-bearing mechanical elements that contribute to the ability of bile canaliculi to withstand elevated luminal pressure.
The small GTPase ARF3 controls invasion modality and metastasis by regulating N-cadherin levels
Sandilands et al. show that ARF3 acts as a rheostat for the modality of invasion via association with, and control of, N-cadherin turnover. This ARF3/N-cadherin interaction regulates metastasis in vivo and can identify prostate cancer patients with metastatic, poor-outcome disease.
LGI3/2–ADAM23 interactions cluster Kv1 channels in myelinated axons to regulate refractory period
Kozar-Gillan and colleagues reveal a novel molecular pathway in node of Ranvier formation by demonstrating that LGI3/2–ADAM23 interactions cluster and stabilize Shaker-type voltage-gated potassium channels (Kv1) in myelinated axons. These myelin concealed Kv1 channels contribute to basic axonal properties to secure reliable high-frequency firing.
Tools
Rapid profiling of DNA replication dynamics using mass spectrometry–based analysis of nascent DNA
Ashour et al. present a mass spectrometry–based tool to assay DNA replication. The technique, termed mass-spectrometry–based analysis of nascent DNA (MS-BAND), permits quantitation of replication in human and bacterial cells, as well as mitochondria. MS-BAND can perform higher-throughput replication analysis, which may prove advantageous compared to established methods.
Quantifying organellar ultrastructure in cryo-electron tomography using a surface morphometrics pipeline
Barad and Medina et al. present a pipeline for quantifying the architecture of organellar membranes in cells visualized by cryo-electron tomography. They use this pipeline to detect changes in the membrane ultrastructure of fragmented and elongated mitochondria and identify statistically significant changes upon induction of ER stress.
Semi-automated 3D fluorescence speckle analyzer (3D-Speckler) for microscope calibration and nanoscale measurement
Loi et al. introduce 3D-Speckler, a powerful and high-throughput image analysis software with a user-friendly interface that offers semi-automated, multi-dimensional measurements and corrections of fluorescent particles including 2D/3D size, localization with nanometer accuracy, and intensity for routine microscope calibration and quantitative analyses of biological structures.
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