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Journal Articles

A Rab1 interactome illuminates a dual role in autophagy and membrane trafficking

Alexander R. van Vliet, Alison K. Gillingham, Tomos E. Morgan, Yohei Ohashi, Tom S. Smith, Ferdos Abid Ali, Sean Munro

J Cell Biol (2026) 225 (3): e202507084.

https://doi.org/10.1083/jcb.202507084

Published: 06 January 2026

View article titled, A Rab1 interactome illuminates a dual role in autophagy and membrane trafficking

Includes: Supplementary data

Journal Articles

Steady and escort cyst cells regulate Drosophila germline stem cell differentiation and death

Aya Ben-Hamo-Arad, Neven Serhan, Lilach Porat-Kuperstein, Boris Shklyar, Lilach Simchi, Alina Kolpakova, Eli Arama, Hila Toledano

J Cell Biol (2025) 225 (2): e202501134.

https://doi.org/10.1083/jcb.202501134

Published: 16 December 2025

View article titled, Steady and escort cyst cells regulate Drosophila germline stem cell differentiation and death

Includes: Supplementary data

Journal Articles

Bacterial CipB is an exogenous receptor to drive the mitophagy-TFEB axis and promote pathogenesis

In Special Collection:

Autophagy 2026

Shuai Liu, Lina Ma, Ruiqi Lv, Liangting Guo, Xing Pan, Shufan Hu, Shan Li

J Cell Biol (2025) 225 (1): e202503028.

https://doi.org/10.1083/jcb.202503028

Published: 21 November 2025

View article titled, Bacterial CipB is an exogenous receptor to drive the mitophagy-TFEB axis and promote pathogenesis

Includes: Supplementary data

Journal Articles

SCF^FBXO21-mediated ubiquitination and degradation of NMNAT2 regulates axon survival in nerve injury

In Special Collection:

Cellular Neurobiology 2025

Wenjing Long, Shunyi Li, Qiangqiang Wang, Wenkai Yue, Yanbin Fu, Haiqiong Wang, Mingsheng Jiang, Xianyan Hu, Yunxia Li, Jihong Cui, Ang Li, Yaoyang Zhang, Zairong Zhang, Yanshan Fang

J Cell Biol (2025) 224 (11): e202501072.

https://doi.org/10.1083/jcb.202501072

Published: 30 September 2025

View article titled, SCFFBXO21-mediated ubiquitination and degradation of NMNAT2 regulates axon survival in nerve injury

Includes: Supplementary data

Journal Articles

ATG16L1 controls mammalian vacuolar proton ATPase

Thabata L.A. Duque, Masroor Paddar, Einar Trosdal, Ruheena Javed, Lee Allers, Michal H. Mudd, Prithvi Akepati, Soumya R. Mishra, Michelle Salemi, Brett Phinney, Shawn B. Bratton, Thomas Wileman, Vojo Deretic

J Cell Biol (2025) 224 (10): e202503166.

https://doi.org/10.1083/jcb.202503166

Published: 09 September 2025

View article titled, ATG16L1 controls mammalian vacuolar proton ATPase

Includes: Supplementary data

Journal Articles

ATG conjugation–dependent/independent mechanisms underlie lysosomal stress–induced TFEB regulation

Shiori Akayama, Takayuki Shima, Tatsuya Kaminishi, Mengying Cui, Jlenia Monfregola, Kohei Nishino, Andrea Ballabio, Hidetaka Kosako, Tamotsu Yoshimori, Shuhei Nakamura

J Cell Biol (2025) 224 (10): e202307079.

https://doi.org/10.1083/jcb.202307079

Published: 29 August 2025

View article titled, ATG conjugation–dependent/independent mechanisms underlie lysosomal stress–induced TFEB regulation

Includes: Supplementary data

Journal Articles

Identification of organelle-specific autophagy regulators from tandem CRISPR screens

In Special Collection:

The Year in Cell Biology: 2025

Truc T. Losier, Karyn E. King, Maxime W.C. Rousseaux, Ryan C. Russell

J Cell Biol (2025) 224 (10): e202405138.

https://doi.org/10.1083/jcb.202405138

Published: 21 August 2025

View article titled, Identification of organelle-specific autophagy regulators from tandem CRISPR screens

Includes: Supplementary data

Journal Articles

SOD1 is delivered to lysosomes via autophagy to maintain lysosomal function and integrity

In Special Collection:

Autophagy 2026

Yanzhe Zheng, Meng Li, Xuelin Chen, Ze Zheng, Zixuan Chen, Ruilin Tian, Yan G. Zhao

J Cell Biol (2025) 224 (10): e202501007.

https://doi.org/10.1083/jcb.202501007

Published: 07 August 2025

View article titled, SOD1 is delivered to lysosomes via autophagy to maintain lysosomal function and integrity

Includes: Supplementary data

Journal Articles

The rapidly expanding role of LC3-interacting regions in autophagy

In Special Collection:

Autophagy 2026

Brian J. North, Dorotea Fracchiolla, Michael J. Ragusa, Sascha Martens, Christopher J. Shoemaker

J Cell Biol (2025) 224 (8): e202504076.

https://doi.org/10.1083/jcb.202504076

Published: 24 July 2025

View article titled, The rapidly expanding role of LC3-interacting regions in autophagy

Journal Articles

Driven to cannibalism: A hormonal trigger for phagocytosis

Amanda M. Powell, Elizabeth T. Ables

J Cell Biol (2025) 224 (8): e202506198.

https://doi.org/10.1083/jcb.202506198

Published: 17 July 2025

View article titled, Driven to cannibalism: A hormonal trigger for phagocytosis

Journal Articles

Ecdysone regulates phagocytic cell fate of epithelial cells in developing Drosophila eggs

In Special Collection:

The Year in Cell Biology: 2025

Gaurab Ghosh, Devyan Das, Abhrajyoti Nandi, Souvik De, Sreeramaiah N. Gangappa, Mohit Prasad

J Cell Biol (2025) 224 (8): e202411073.

https://doi.org/10.1083/jcb.202411073

Published: 28 May 2025

View article titled, Ecdysone regulates phagocytic cell fate of epithelial cells in developing Drosophila eggs

Includes: Supplementary data

Journal Articles

The mitophagy receptors BNIP3 and NIX mediate tight attachment and expansion of the isolation membrane to mitochondria

In Special Collection:

Autophagy 2026

Shun-ichi Yamashita, Ritsuko Arai, Hiroshi Hada, Benjamin Scott Padman, Michael Lazarou, David C. Chan, Tomotake Kanki, Satoshi Waguri

J Cell Biol (2025) 224 (7): e202408166.

https://doi.org/10.1083/jcb.202408166

Published: 13 May 2025

View article titled, The mitophagy receptors BNIP3 and NIX mediate tight attachment and expansion of the isolation membrane to mitochondria

Includes: Supplementary data

Journal Articles

Rab GTPases as “eat me” signals for selective autophagy

Yan G. Zhao

J Cell Biol (2025) 224 (5): e202502030.

https://doi.org/10.1083/jcb.202502030

Published: 10 April 2025

View article titled, Rab GTPases as “eat me” signals for selective autophagy

Journal Articles

ESCRT-I and PTPN23 mediate microautophagy of ubiquitylated tau aggregates

In Special Collection:

Cellular Neurobiology 2025

Yusen Men, Shoshiro Hirayama, Shinpei Ao, Yasuyuki Sakurai, Yuri Shibata, Megan Lo, Yusuke Sato, Shigeo Murata

J Cell Biol (2025) 224 (6): e202406120.

https://doi.org/10.1083/jcb.202406120

Published: 08 April 2025

View article titled, ESCRT-I and PTPN23 mediate microautophagy of ubiquitylated tau aggregates

Includes: Supplementary data

Journal Articles

Rab GTPases are evolutionarily conserved signals mediating selective autophagy

In Special Collection:

Autophagy 2026

Pengwei Zhao, Rui Tian, Dandan Song, Qi Zhu, Xianming Ding, Jianqin Zhang, Beibei Cao, Mengyuan Zhang, Yilu Xu, Jie Fang, Jieqiong Tan, Cong Yi, Hongguang Xia, Wei Liu, Wei Zou, Qiming Sun

J Cell Biol (2025) 224 (5): e202410150.

https://doi.org/10.1083/jcb.202410150

Published: 08 April 2025

View article titled, Rab GTPases are evolutionarily conserved signals mediating selective autophagy

Includes: Supplementary data

Journal Articles

The deubiquitinase USP45 inhibits autophagy through actin regulation by Coronin 1B

Yuchieh Jay Lin, Li-Ting Huang, Po-Yuan Ke, Guang-Chao Chen

J Cell Biol (2025) 224 (5): e202407014.

https://doi.org/10.1083/jcb.202407014

Published: 11 March 2025

View article titled, The deubiquitinase USP45 inhibits autophagy through actin regulation by Coronin 1B

Includes: Supplementary data

Journal Articles

SNX10 functions as a modulator of piecemeal mitophagy and mitochondrial bioenergetics

In Special Collection:

Autophagy 2026

Laura Trachsel-Moncho, Chiara Veroni, Benan John Mathai, Ana Lapao, Sakshi Singh, Nagham Theres Asp, Sebastian W. Schultz, Serhiy Pankiv, Anne Simonsen

J Cell Biol (2025) 224 (5): e202404009.

https://doi.org/10.1083/jcb.202404009

Published: 07 March 2025

View article titled, SNX10 functions as a modulator of piecemeal mitophagy and mitochondrial bioenergetics

Includes: Supplementary data

Journal Articles

The LC3-interacting region of NBR1 is a protein interaction hub enabling optimal flux

Brian J. North, Amelia E. Ohnstad, Michael J. Ragusa, Christopher J. Shoemaker

J Cell Biol (2025) 224 (4): e202407105.

https://doi.org/10.1083/jcb.202407105

Published: 10 February 2025

View article titled, The LC3-interacting region of NBR1 is a protein interaction hub enabling optimal flux

Includes: Supplementary data

Journal Articles

ATG9A facilitates the closure of mammalian autophagosomes

In Special Collection:

Autophagy 2026

Ruheena Javed, Muriel Mari, Einar Trosdal, Thabata Duque, Masroor Ahmad Paddar, Lee Allers, Michal H. Mudd, Aurore Claude-Taupin, Prithvi Reddy Akepati, Emily Hendrix, Yi He, Michelle Salemi, Brett Phinney, Yasuo Uchiyama, Fulvio Reggiori, Vojo Deretic

J Cell Biol (2025) 224 (2): e202404047.

https://doi.org/10.1083/jcb.202404047

Published: 02 January 2025

View article titled, ATG9A facilitates the closure of mammalian autophagosomes

Includes: Supplementary data

Journal Articles

Synaptic sabotage: How Tau and α-Synuclein undermine synaptic health

Valerie Uytterhoeven, Patrik Verstreken, Eliana Nachman

J Cell Biol (2024) 224 (2): e202409104.

https://doi.org/10.1083/jcb.202409104

Published: 24 December 2024

View article titled, Synaptic sabotage: How Tau and α-Synuclein undermine synaptic health

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A Rab1 interactome illuminates a dual role in autophagy and membrane trafficking

Steady and escort cyst cells regulate Drosophila germline stem cell differentiation and death

Bacterial CipB is an exogenous receptor to drive the mitophagy-TFEB axis and promote pathogenesis

SCF^FBXO21-mediated ubiquitination and degradation of NMNAT2 regulates axon survival in nerve injury

ATG16L1 controls mammalian vacuolar proton ATPase

ATG conjugation–dependent/independent mechanisms underlie lysosomal stress–induced TFEB regulation

Identification of organelle-specific autophagy regulators from tandem CRISPR screens

SOD1 is delivered to lysosomes via autophagy to maintain lysosomal function and integrity

The rapidly expanding role of LC3-interacting regions in autophagy

Driven to cannibalism: A hormonal trigger for phagocytosis

Ecdysone regulates phagocytic cell fate of epithelial cells in developing Drosophila eggs

The mitophagy receptors BNIP3 and NIX mediate tight attachment and expansion of the isolation membrane to mitochondria

Rab GTPases as “eat me” signals for selective autophagy

ESCRT-I and PTPN23 mediate microautophagy of ubiquitylated tau aggregates

Rab GTPases are evolutionarily conserved signals mediating selective autophagy

The deubiquitinase USP45 inhibits autophagy through actin regulation by Coronin 1B

SNX10 functions as a modulator of piecemeal mitophagy and mitochondrial bioenergetics

The LC3-interacting region of NBR1 is a protein interaction hub enabling optimal flux

ATG9A facilitates the closure of mammalian autophagosomes

Synaptic sabotage: How Tau and α-Synuclein undermine synaptic health

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