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Journal Articles

Bacterial CipB is an exogenous receptor to drive the mitophagy-TFEB axis and promote pathogenesis

Shuai Liu, Lina Ma, Ruiqi Lv, Liangting Guo, Xing Pan, Shufan Hu, Shan Li
Journal: Journal of Cell Biology
J Cell Biol (2025) 225 (1): e202503028.
https://doi.org/10.1083/jcb.202503028
Published: 21 November 2025
View article titled, Bacterial CipB is an exogenous receptor to drive the mitophagy-TFEB axis and promote pathogenesis
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Includes: Supplementary data
Journal Articles

SCFFBXO21-mediated ubiquitination and degradation of NMNAT2 regulates axon survival in nerve injury

In Special Collection:
Cellular Neurobiology 2025
Wenjing Long, Shunyi Li, Qiangqiang Wang, Wenkai Yue, Yanbin Fu, Haiqiong Wang, Mingsheng Jiang, Xianyan Hu, Yunxia Li, Jihong Cui, Ang Li, Yaoyang Zhang, Zairong Zhang, Yanshan Fang
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (11): e202501072.
https://doi.org/10.1083/jcb.202501072
Published: 30 September 2025
View article titled, SCFFBXO21-mediated ubiquitination and degradation of NMNAT2 regulates axon survival in nerve injury
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Includes: Supplementary data
Journal Articles

ATG16L1 controls mammalian vacuolar proton ATPase

Thabata L.A. Duque, Masroor Paddar, Einar Trosdal, Ruheena Javed, Lee Allers, Michal H. Mudd, Prithvi Akepati, Soumya R. Mishra, Michelle Salemi, Brett Phinney, Shawn B. Bratton, Thomas Wileman, Vojo Deretic
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (10): e202503166.
https://doi.org/10.1083/jcb.202503166
Published: 09 September 2025
View article titled, ATG16L1 controls mammalian vacuolar proton ATPase
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Includes: Supplementary data
Journal Articles

ATG conjugation–dependent/independent mechanisms underlie lysosomal stress–induced TFEB regulation

Shiori Akayama, Takayuki Shima, Tatsuya Kaminishi, Mengying Cui, Jlenia Monfregola, Kohei Nishino, Andrea Ballabio, Hidetaka Kosako, Tamotsu Yoshimori, Shuhei Nakamura
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (10): e202307079.
https://doi.org/10.1083/jcb.202307079
Published: 29 August 2025
View article titled, ATG conjugation–dependent/independent mechanisms underlie lysosomal stress–induced TFEB regulation
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Includes: Supplementary data
Journal Articles

Identification of organelle-specific autophagy regulators from tandem CRISPR screens

In Special Collection:
The Year in Cell Biology: 2025
Truc T. Losier, Karyn E. King, Maxime W.C. Rousseaux, Ryan C. Russell
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (10): e202405138.
https://doi.org/10.1083/jcb.202405138
Published: 21 August 2025
View article titled, Identification of organelle-specific autophagy regulators from tandem CRISPR screens
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Includes: Supplementary data
Journal Articles

SOD1 is delivered to lysosomes via autophagy to maintain lysosomal function and integrity

Yanzhe Zheng, Meng Li, Xuelin Chen, Ze Zheng, Zixuan Chen, Ruilin Tian, Yan G. Zhao
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (10): e202501007.
https://doi.org/10.1083/jcb.202501007
Published: 07 August 2025
View article titled, SOD1 is delivered to lysosomes via autophagy to maintain lysosomal function and integrity
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Includes: Supplementary data
Journal Articles

The rapidly expanding role of LC3-interacting regions in autophagy

Brian J. North, Dorotea Fracchiolla, Michael J. Ragusa, Sascha Martens, Christopher J. Shoemaker
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (8): e202504076.
https://doi.org/10.1083/jcb.202504076
Published: 24 July 2025
View article titled, The rapidly expanding role of LC3-interacting regions in autophagy
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Journal Articles

Driven to cannibalism: A hormonal trigger for phagocytosis

Amanda M. Powell, Elizabeth T. Ables
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (8): e202506198.
https://doi.org/10.1083/jcb.202506198
Published: 17 July 2025
View article titled, Driven to cannibalism: A hormonal trigger for phagocytosis
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Journal Articles

Ecdysone regulates phagocytic cell fate of epithelial cells in developing Drosophila eggs

In Special Collection:
The Year in Cell Biology: 2025
Gaurab Ghosh, Devyan Das, Abhrajyoti Nandi, Souvik De, Sreeramaiah N. Gangappa, Mohit Prasad
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (8): e202411073.
https://doi.org/10.1083/jcb.202411073
Published: 28 May 2025
View article titled, Ecdysone regulates phagocytic cell fate of epithelial cells in developing Drosophila eggs
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Includes: Supplementary data
Journal Articles

The mitophagy receptors BNIP3 and NIX mediate tight attachment and expansion of the isolation membrane to mitochondria

Shun-ichi Yamashita, Ritsuko Arai, Hiroshi Hada, Benjamin Scott Padman, Michael Lazarou, David C. Chan, Tomotake Kanki, Satoshi Waguri
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (7): e202408166.
https://doi.org/10.1083/jcb.202408166
Published: 13 May 2025
View article titled, The mitophagy receptors BNIP3 and NIX mediate tight attachment and expansion of the isolation membrane to mitochondria
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Includes: Supplementary data
Journal Articles

Rab GTPases as “eat me” signals for selective autophagy

Yan G. Zhao
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (5): e202502030.
https://doi.org/10.1083/jcb.202502030
Published: 10 April 2025
View article titled, Rab GTPases as “eat me” signals for selective autophagy
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Journal Articles

Rab GTPases are evolutionarily conserved signals mediating selective autophagy

Pengwei Zhao, Rui Tian, Dandan Song, Qi Zhu, Xianming Ding, Jianqin Zhang, Beibei Cao, Mengyuan Zhang, Yilu Xu, Jie Fang, Jieqiong Tan, Cong Yi, Hongguang Xia, Wei Liu, Wei Zou, Qiming Sun
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (5): e202410150.
https://doi.org/10.1083/jcb.202410150
Published: 08 April 2025
View article titled, Rab GTPases are evolutionarily conserved signals mediating selective autophagy
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Includes: Supplementary data
Journal Articles

ESCRT-I and PTPN23 mediate microautophagy of ubiquitylated tau aggregates

In Special Collection:
Cellular Neurobiology 2025
Yusen Men, Shoshiro Hirayama, Shinpei Ao, Yasuyuki Sakurai, Yuri Shibata, Megan Lo, Yusuke Sato, Shigeo Murata
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (6): e202406120.
https://doi.org/10.1083/jcb.202406120
Published: 08 April 2025
View article titled, ESCRT-I and PTPN23 mediate microautophagy of ubiquitylated tau aggregates
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Includes: Supplementary data
Journal Articles

The deubiquitinase USP45 inhibits autophagy through actin regulation by Coronin 1B

Yuchieh Jay Lin, Li-Ting Huang, Po-Yuan Ke, Guang-Chao Chen
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (5): e202407014.
https://doi.org/10.1083/jcb.202407014
Published: 11 March 2025
View article titled, The deubiquitinase USP45 inhibits autophagy through actin regulation by Coronin 1B
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Includes: Supplementary data
Journal Articles

SNX10 functions as a modulator of piecemeal mitophagy and mitochondrial bioenergetics

Laura Trachsel-Moncho, Chiara Veroni, Benan John Mathai, Ana Lapao, Sakshi Singh, Nagham Theres Asp, Sebastian W. Schultz, Serhiy Pankiv, Anne Simonsen
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (5): e202404009.
https://doi.org/10.1083/jcb.202404009
Published: 07 March 2025
View article titled, SNX10 functions as a modulator of piecemeal mitophagy and mitochondrial bioenergetics
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Includes: Supplementary data
Journal Articles

The LC3-interacting region of NBR1 is a protein interaction hub enabling optimal flux

Brian J. North, Amelia E. Ohnstad, Michael J. Ragusa, Christopher J. Shoemaker
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (4): e202407105.
https://doi.org/10.1083/jcb.202407105
Published: 10 February 2025
View article titled, The LC3-interacting region of NBR1 is a protein interaction hub enabling optimal flux
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Includes: Supplementary data
Journal Articles

ATG9A facilitates the closure of mammalian autophagosomes

Ruheena Javed, Muriel Mari, Einar Trosdal, Thabata Duque, Masroor Ahmad Paddar, Lee Allers, Michal H. Mudd, Aurore Claude-Taupin, Prithvi Reddy Akepati, Emily Hendrix, Yi He, Michelle Salemi, Brett Phinney, Yasuo Uchiyama, Fulvio Reggiori, Vojo Deretic
Journal: Journal of Cell Biology
J Cell Biol (2025) 224 (2): e202404047.
https://doi.org/10.1083/jcb.202404047
Published: 02 January 2025
View article titled, ATG9A facilitates the closure of mammalian autophagosomes
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Includes: Supplementary data
Journal Articles

Synaptic sabotage: How Tau and α-Synuclein undermine synaptic health

Valerie Uytterhoeven, Patrik Verstreken, Eliana Nachman
Journal: Journal of Cell Biology
J Cell Biol (2024) 224 (2): e202409104.
https://doi.org/10.1083/jcb.202409104
Published: 24 December 2024
View article titled, Synaptic sabotage: How Tau and α-Synuclein undermine synaptic health
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Journal Articles

Epidermal maintenance of Langerhans cells relies on autophagy-regulated lipid metabolism

In Special Collection:
Immune Cell Biology 2025
Florent Arbogast, Raquel Sal-Carro, Wacym Boufenghour, Quentin Frenger, Delphine Bouis, Louise Filippi De La Palavesa, Jean-Daniel Fauny, Olivier Griso, Hélène Puccio, Rebecca Fima, Thierry Huby, Emmanuel L. Gautier, Anne Molitor, Raphaël Carapito, Seiamak Bahram, Nikolaus Romani, Björn E. Clausen, Benjamin Voisin, Christopher G. Mueller, Frédéric Gros, Vincent Flacher
Journal: Journal of Cell Biology
J Cell Biol (2024) 224 (2): e202403178.
https://doi.org/10.1083/jcb.202403178
Published: 13 November 2024
View article titled, Epidermal maintenance of Langerhans cells relies on autophagy-regulated lipid metabolism
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Includes: Supplementary data
Journal Articles

Migfilin promotes autophagic flux through direct interaction with SNAP29 and Vamp8

Renwei Cai, Panzhu Bai, Meiling Quan, Yanyan Ding, Wenjie Wei, Chengmin Liu, Aihua Yang, Zailin Xiong, Guizhen Li, Binbin Li, Yi Deng, Ruijun Tian, Yan G. Zhao, Chuanyue Wu, Ying Sun
Journal: Journal of Cell Biology
J Cell Biol (2024) 223 (11): e202312119.
https://doi.org/10.1083/jcb.202312119
Published: 16 September 2024
View article titled, Migfilin promotes autophagic flux through direct interaction with SNAP29 and Vamp8
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Includes: Supplementary data