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Journal Articles

TGF-β regulates the stem-like state of PD-1⁺ TCF-1⁺ virus-specific CD8 T cells during chronic infection

Yinghong Hu, William H. Hudson, Haydn T. Kissick, Christopher B. Medina, Antonio P. Baptista, Chaoyu Ma, Wei Liao, Ronald N. Germain, Shannon J. Turley, Nu Zhang, Rafi Ahmed

J Exp Med (2022) 219 (10): e20211574.

https://doi.org/10.1084/jem.20211574

Published: 18 August 2022

View article titled, TGF-β regulates the stem-like state of PD-1<sup>+</sup> TCF-1<sup>+</sup> virus-specific CD8 T cells during chronic infection

Includes: Supplementary data

Journal Articles

Auto-antibodies to type I IFNs can underlie adverse reactions to yellow fever live attenuated vaccine

In Special Collection:

Antibodies at the Forefront of Disease Treatment , JEM Clinical Immunology Collection 2021

J Exp Med (2021) 218 (4): e20202486.

https://doi.org/10.1084/jem.20202486

Published: 05 February 2021

View article titled, Auto-antibodies to type I IFNs can underlie adverse reactions to yellow fever live attenuated vaccine

Includes: Supplementary data

Journal Articles

Interplay between regulatory T cells and PD-1 in modulating T cell exhaustion and viral control during chronic LCMV infection

Pablo Penaloza-MacMaster, Alice O. Kamphorst, Andreas Wieland, Koichi Araki, Smita S. Iyer, Erin E. West, Leigh O’Mara, Shu Yang, Bogumila T. Konieczny, Arlene H. Sharpe, Gordon J. Freeman, Alexander Y. Rudensky, Rafi Ahmed

J Exp Med (2014) 211 (9): 1905–1918.

https://doi.org/10.1084/jem.20132577

Published: 11 August 2014

View article titled, Interplay between regulatory T cells and PD-1 in modulating T cell exhaustion and viral control during chronic LCMV infection

Journal Articles

Blimp-1 represses CD8 T cell expression of PD-1 using a feed-forward transcriptional circuit during acute viral infection

Peiyuan Lu, Benjamin A. Youngblood, James W. Austin, Ata Ur Rasheed Mohammed, Royce Butler, Rafi Ahmed, Jeremy M. Boss

J Exp Med (2014) 211 (3): 515–527.

https://doi.org/10.1084/jem.20130208

Published: 03 March 2014

View article titled, Blimp-1 represses CD8 T cell expression of PD-1 using a feed-forward transcriptional circuit during acute viral infection

Includes: Supplementary data

Journal Articles

Immune history shapes specificity of pandemic H1N1 influenza antibody responses

Yang Li, Jaclyn L. Myers, David L. Bostick, Colleen B. Sullivan, Jonathan Madara, Susanne L. Linderman, Qin Liu, Donald M. Carter, Jens Wrammert, Susanna Esposito, Nicola Principi, Joshua B. Plotkin, Ted M. Ross, Rafi Ahmed, Patrick C. Wilson, Scott E. Hensley

J Exp Med (2013) 210 (8): 1493–1500.

https://doi.org/10.1084/jem.20130212

Published: 15 July 2013

View article titled, Immune history shapes specificity of pandemic H1N1 influenza antibody responses

Includes: Supplementary data

Journal Articles

Learning vaccinology from viral infections

Rafi Ahmed, Bali Pulendran

J Exp Med (2011) 208 (12): 2347–2349.

https://doi.org/10.1084/jem.20112321

Published: 21 November 2011

View article titled, Learning vaccinology from viral infections

Journal Articles

Broadly cross-reactive antibodies dominate the human B cell response against 2009 pandemic H1N1 influenza virus infection

J Exp Med (2011) 208 (2): 411.

https://doi.org/10.1084/jem.201013522082c

Published: 07 February 2011

View article titled, Broadly cross-reactive antibodies dominate the human B cell response against 2009 pandemic H1N1 influenza virus infection

Journal Articles

Broadly cross-reactive antibodies dominate the human B cell response against 2009 pandemic H1N1 influenza virus infection

J Exp Med (2011) 208 (1): 181–193.

https://doi.org/10.1084/jem.20101352

Published: 10 January 2011

View article titled, Broadly cross-reactive antibodies dominate the human B cell response against 2009 pandemic H1N1 influenza virus infection

Includes: Supplementary data

Journal Articles

Pathogenic virus-specific T cells cause disease during treatment with the calcineurin inhibitor FK506: implications for transplantation

Koichi Araki, Shivaprakash Gangappa, Dirck L. Dillehay, Barry T. Rouse, Christian P. Larsen, Rafi Ahmed

J Exp Med (2010) 207 (11): 2355–2367.

https://doi.org/10.1084/jem.20100124

Published: 04 October 2010

View article titled, Pathogenic virus-specific T cells cause disease during treatment with the calcineurin inhibitor FK506: implications for transplantation

Includes: Supplementary data

Journal Articles

Dynamic T cell migration program provides resident memory within intestinal epithelium

David Masopust, Daniel Choo, Vaiva Vezys, E. John Wherry, Jaikumar Duraiswamy, Rama Akondy, Jun Wang, Kerry A. Casey, Daniel L. Barber, Kim S. Kawamura, Kathryn A. Fraser, Richard J. Webby, Volker Brinkmann, Eugene C. Butcher, Kenneth A. Newell, Rafi Ahmed

J Exp Med (2010) 207 (3): 553–564.

https://doi.org/10.1084/jem.20090858

Published: 15 February 2010

View article titled, Dynamic T cell migration program provides resident memory within intestinal epithelium

Includes: Supplementary data

Journal Articles

Enhancing therapeutic vaccination by blocking PD-1–mediated inhibitory signals during chronic infection

Sang-Jun Ha, Scott N. Mueller, E. John Wherry, Daniel L. Barber, Rachael D. Aubert, Arlene H. Sharpe, Gordon J. Freeman, Rafi Ahmed

J Exp Med (2008) 205 (3): 543–555.

https://doi.org/10.1084/jem.20071949

Published: 10 March 2008

View article titled, Enhancing therapeutic vaccination by blocking PD-1–mediated inhibitory signals during chronic infection

Includes: Supplementary data

Journal Articles

Functional and genomic profiling of effector CD8 T cell subsets with distinct memory fates

Surojit Sarkar, Vandana Kalia, W. Nicholas Haining, Bogumila T. Konieczny, Shruti Subramaniam, Rafi Ahmed

J Exp Med (2008) 205 (3): 625–640.

https://doi.org/10.1084/jem.20071641

Published: 03 March 2008

View article titled, Functional and genomic profiling of effector CD8 T cell subsets with distinct memory fates

Includes: Supplementary data

Journal Articles

Reinvigorating exhausted HIV-specific T cells via PD-1–PD-1 ligand blockade

Gordon J. Freeman, E. John Wherry, Rafi Ahmed, Arlene H. Sharpe

J Exp Med (2006) 203 (10): 2223–2227.

https://doi.org/10.1084/jem.20061800

Published: 25 September 2006

View article titled, Reinvigorating exhausted HIV-specific T cells via PD-1–PD-1 ligand blockade

Journal Articles

Continuous recruitment of naive T cells contributes to heterogeneity of antiviral CD8 T cells during persistent infection

Vaiva Vezys, David Masopust, Christopher C. Kemball, Daniel L. Barber, Leigh A. O'Mara, Christian P. Larsen, Thomas C. Pearson, Rafi Ahmed, Aron E. Lukacher

J Exp Med (2006) 203 (10): 2263–2269.

https://doi.org/10.1084/jem.20060995

Published: 11 September 2006

View article titled, Continuous recruitment of naive T cells contributes to heterogeneity of antiviral CD8 T cells during persistent infection

Journal Articles

Yellow fever vaccine YF-17D activates multiple dendritic cell subsets via TLR2, 7, 8, and 9 to stimulate polyvalent immunity

Troy Querec, Soumaya Bennouna, Sefik Alkan, Yasmina Laouar, Keith Gorden, Richard Flavell, Shizuo Akira, Rafi Ahmed, Bali Pulendran

J Exp Med (2006) 203 (2): 413–424.

https://doi.org/10.1084/jem.20051720

Published: 06 February 2006

View article titled, Yellow fever vaccine YF-17D activates multiple dendritic cell subsets via TLR2, 7, 8, and 9 to stimulate polyvalent immunity

Includes: Supplementary data

Journal Articles

Interleukin 15 Is Required for Proliferative Renewal of Virus-specific Memory CD8 T Cells

Todd C. Becker, E. John Wherry, David Boone, Kaja Murali-Krishna, Rustom Antia, Averil Ma, Rafi Ahmed

J Exp Med (2002) 195 (12): 1541–1548.

https://doi.org/10.1084/jem.20020369

Published: 17 June 2002

View article titled, Interleukin 15 Is Required for Proliferative Renewal of Virus-specific Memory CD8 T Cells

Journal Articles

Estimating the Precursor Frequency of Naive Antigen-specific CD8 T Cells

Joseph N. Blattman, Rustom Antia, David J.D. Sourdive, Xiaochi Wang, Susan M. Kaech, Kaja Murali-Krishna, John D. Altman, Rafi Ahmed

J Exp Med (2002) 195 (5): 657–664.

https://doi.org/10.1084/jem.20001021

Published: 04 March 2002

View article titled, Estimating the Precursor Frequency of Naive Antigen-specific CD8 T Cells

Journal Articles

Differentiating between Memory and Effector Cd8 T Cells by Altered Expression of Cell Surface O-Glycans

Laurie E. Harrington, Marisa Galvan, Linda G. Baum, John D. Altman, Rafi Ahmed

J Exp Med (2000) 191 (7): 1241–1246.

https://doi.org/10.1084/jem.191.7.1241

Published: 03 April 2000

View article titled, Differentiating between Memory and Effector Cd8 T Cells by Altered Expression of Cell Surface O-Glycans

Journal Articles

Two Roads Diverged: Interferon α/β– and Interleukin 12–mediated Pathways in Promoting T Cell Interferon γ Responses during Viral Infection

Leslie P. Cousens, Ron Peterson, Sang Hsu, Andrew Dorner, John D. Altman, Rafi Ahmed, Christine A. Biron

J Exp Med (1999) 189 (8): 1315–1328.

https://doi.org/10.1084/jem.189.8.1315

Published: 19 April 1999

View article titled, Two Roads Diverged: Interferon α/β– and Interleukin 12–mediated Pathways in Promoting T Cell Interferon γ Responses during Viral Infection

Journal Articles

Viral Immune Evasion Due to Persistence of Activated T Cells Without Effector Function

Allan J. Zajac, Joseph N. Blattman, Kaja Murali-Krishna, David J.D. Sourdive, M. Suresh, John D. Altman, Rafi Ahmed

J Exp Med (1998) 188 (12): 2205–2213.

https://doi.org/10.1084/jem.188.12.2205

Published: 21 December 1998

View article titled, Viral Immune Evasion Due to Persistence of Activated T Cells Without Effector Function

NARROW

TGF-β regulates the stem-like state of PD-1⁺ TCF-1⁺ virus-specific CD8 T cells during chronic infection

Auto-antibodies to type I IFNs can underlie adverse reactions to yellow fever live attenuated vaccine

Interplay between regulatory T cells and PD-1 in modulating T cell exhaustion and viral control during chronic LCMV infection

Blimp-1 represses CD8 T cell expression of PD-1 using a feed-forward transcriptional circuit during acute viral infection

Immune history shapes specificity of pandemic H1N1 influenza antibody responses

Learning vaccinology from viral infections

Broadly cross-reactive antibodies dominate the human B cell response against 2009 pandemic H1N1 influenza virus infection

Broadly cross-reactive antibodies dominate the human B cell response against 2009 pandemic H1N1 influenza virus infection

Pathogenic virus-specific T cells cause disease during treatment with the calcineurin inhibitor FK506: implications for transplantation

Dynamic T cell migration program provides resident memory within intestinal epithelium

Enhancing therapeutic vaccination by blocking PD-1–mediated inhibitory signals during chronic infection

Functional and genomic profiling of effector CD8 T cell subsets with distinct memory fates

Reinvigorating exhausted HIV-specific T cells via PD-1–PD-1 ligand blockade

Continuous recruitment of naive T cells contributes to heterogeneity of antiviral CD8 T cells during persistent infection

Yellow fever vaccine YF-17D activates multiple dendritic cell subsets via TLR2, 7, 8, and 9 to stimulate polyvalent immunity

Interleukin 15 Is Required for Proliferative Renewal of Virus-specific Memory CD8 T Cells

Estimating the Precursor Frequency of Naive Antigen-specific CD8 T Cells

Differentiating between Memory and Effector Cd8 T Cells by Altered Expression of Cell Surface O-Glycans

Two Roads Diverged: Interferon α/β– and Interleukin 12–mediated Pathways in Promoting T Cell Interferon γ Responses during Viral Infection

Viral Immune Evasion Due to Persistence of Activated T Cells Without Effector Function

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