The activation of store-operated Ca2+ entry by Ca2+ store depletion has long been hypothesized to occur via local interactions of the endoplasmic reticulum (ER) and plasma membrane, but the structure involved has never been identified. Store depletion causes the ER Ca2+ sensor stromal interacting molecule 1 (STIM1) to form puncta by accumulating in junctional ER located 10–25 nm from the plasma membrane (see Wu et al. on p. 803 of this issue). We have combined total internal reflection fluorescence (TIRF) microscopy and patch-clamp recording to localize STIM1 and sites of Ca2+ influx through open Ca2+ release–activated Ca2+ (CRAC) channels in Jurkat T cells after store depletion. CRAC channels open only in the immediate vicinity of STIM1 puncta, restricting Ca2+ entry to discrete sites comprising a small fraction of the cell surface. Orai1, an essential component of the CRAC channel, colocalizes with STIM1 after store depletion, providing a physical basis for the local activation of Ca2+ influx. These studies reveal for the first time that STIM1 and Orai1 move in a coordinated fashion to form closely apposed clusters in the ER and plasma membranes, thereby creating the elementary unit of store-operated Ca2+ entry.

## Introduction

A wide variety of cell-surface receptors produce Ca2+ signals resulting from the release of Ca2+ from intracellular stores followed by Ca2+ entry through channels in the plasma membrane. This Ca2+ entry process, termed capacitative or store-operated Ca2+ entry (SOCE), is evoked by the depletion of Ca2+ from the lumen of the ER and drives several critical cellular functions, including growth, motility, secretion, and gene expression (Parekh and Putney, 2005). The best-studied store-operated channel (SOC) is the highly Ca2+-selective Ca2+ release–activated Ca2+ (CRAC) channel found in lymphocytes and other hematopoietic cells, which is absolutely required for T cell activation by antigen (Feske et al., 2001; Lewis, 2001).

The structural and mechanistic basis of SOCE has remained a mystery since its first proposal, by Putney (1986). The central issue is how the depletion of Ca2+ from the lumen of the ER controls the activation of SOCs in the plasma membrane. From the outset, it was assumed that the ER was physically in close apposition to the plasma membrane in order for it to communicate with channels in the plasma membrane. This assumption was based primarily on observations that, in some cells, store refilling was absolutely dependent on extracellular Ca2+ (Cao2+) and could occur without a detectable rise in intracellular free Ca2+ concentration ([Ca2+]i). These results implied an intimate relationship between ER and plasma membrane, in effect creating a private pathway for store refilling. Although the initial concept of direct coupling between the ER and plasma membrane was later abandoned, indirect evidence continued to support the idea that the ER is close to Ca2+ entry sites in the plasma membrane (Putney, 1990). Consistent with this view, in oocytes and astrocytes, fluorescence signals from store-operated Ca2+ influx were highest in regions having the highest density of ER (Jaconi et al., 1997; Golovina, 2005). There has been much speculation that the connection between the ER and plasma membrane may resemble the dyad and triad junctions underlying excitation–contraction coupling in muscle. In these cells, the sarcoplasmic reticulum (SR) is positioned within 10–20 nm of the T-tubule (plasma membrane) to enable Ca2+ channels in the plasma membrane to trigger the release of Ca2+ from nearby ryanodine receptors in the SR; in this way, the dyad/triad forms the elementary structural unit of Ca2+ release that triggers muscle contraction (Franzini-Armstrong et al., 1999). By analogy, the ER and closely apposed plasma membrane could be considered the elementary unit of SOCE, but the predicted structures, consisting of ER closely coupled to sites of Ca2+ influx, have never been identified.

The recent identification of stromal interacting molecule 1 (STIM1) as the probable Ca2+ sensor for SOCE offers new strategies in the search for the elementary unit of SOCE. STIM1, a type I ER membrane protein, has a predicted EF-hand domain facing the ER lumen, and mutation of conserved residues likely to be involved in Ca2+ binding activates Ca2+ influx in cells with full stores (Liou et al., 2005; Zhang et al., 2005). Store depletion causes STIM1 to redistribute from a diffuse localization throughout the ER into puncta near the plasma membrane. This redistribution is likely to be involved in CRAC channel activation, because the constitutively active EF-hand mutants of STIM1 show this distribution even when stores are full (Liou et al., 2005; Zhang et al., 2005). Moreover, puncta formation slightly precedes the opening of CRAC channels, consistent with a causal role in SOC activation (see Wu et al. on p. 803 of this issue). Interestingly, ultrastructural analysis shows that puncta correspond to the accumulation of STIM1 in discrete regions of junctional ER lying within 10–25 nm of the plasma membrane (Wu et al., 2006). The proximity of STIM1 puncta to the plasma membrane is close enough to permit local interactions with proteins in the plasma membrane, including Orai1, which has recently been identified as an essential part of the CRAC channel (Feske et al., 2006; Vig et al., 2006; Zhang et al., 2006).

These new studies raise important questions about how STIM1 transmits the activation signal to CRAC channels in the plasma membrane. Do junctional ER structures containing STIM1 provide the proximal stimulus for the activation of CRAC channels by store depletion? Are CRAC channels activated only locally at sites of STIM1 accumulation or more generally throughout the surrounding plasma membrane? What constitutes the basic unit of SOCE? To answer these questions and better understand how Ca2+ store content regulates CRAC channel activity, the spatial relationship between STIM1, Orai1, and open CRAC channels must be determined.

In this study, we have combined total internal reflection fluorescence (TIRF) microscopy and patch-clamp recording to determine the location of active CRAC channels relative to that of STIM1 in the ER. We find that CRAC channel activation in store-depleted cells is tightly restricted to regions directly apposed to STIM1 puncta. These results show for the first time that Ca2+ influx through CRAC channels is not widely dispersed throughout the cell but, rather, is highly concentrated in areas juxtaposed to junctional ER that comprise only a small fraction of the cell surface. Store depletion also causes Orai1 to accumulate at these sites, providing a physical basis for the local activation of CRAC channels by STIM1. These results identify the elementary unit of SOCE and show that it is a dynamic assembly, arising from the coordinated migration of the Ca2+ sensor and its target channel to closely apposed sites in the ER and the plasma membrane.

## Results

### Mapping the spatial distribution of open CRAC channels using TIRF microscopy

The location and density of open CRAC channels was determined by measuring local steady-state [Ca2+]i gradients at the plasma membrane after depleting Ca2+ stores. For this purpose, we adapted a method that had been used previously to localize Ca2+ entry through ryanodine receptors in cardiac myocytes (Song et al., 1998) and voltage-gated Ca2+ channels in excitable cells (Zenisek et al., 2003). Jurkat T cells were dialyzed through the whole-cell recording pipette with 200 μM fluo-5F, a low-affinity, fast-binding Ca2+ indicator, together with an excess (10 mM) of the higher affinity, slower binding Ca2+ chelator, EGTA. EGTA binds Ca2+ too slowly to significantly diminish Ca2+ binding to fluo-5F close to channels, but the higher affinity and concentration of EGTA enables it to outcompete fluo-5F for Ca2+ binding at distances >1 μm from the source (Zenisek et al., 2003), thus restricting the fluo-5F signals to the vicinity of open channels. Further restriction of the signals in the z dimension is afforded by TIRF microscopy, which restricts excitation to distances within ∼200 nm of the membrane.

Our protocol for localizing Ca2+ influx sites is described in Fig. 1. Intracellular Ca2+ stores were depleted by intracellular dialysis with EGTA to ensure maximal CRAC channel activation. Voltage clamp was used to control the driving force for Ca2+ entry and, thus, the flux through open channels. At +38 mV, the driving force is minimal, and control images at this potential show dim baseline fluorescence (Fig. 1 B, F1 and F2). Hyperpolarization to −122 mV elicits a rapid fluorescence increase as Ca2+ enters the cell, and depolarization back to +38 mV rapidly terminates the signal. The baseline fluorescence of cells was generally nonuniform, presumably because of spatial variations in dye concentration and illumination. Therefore, to isolate the Ca2+-dependent signal, the fluorescence change in each image (ΔF = F − F0, where F0 is the mean of control images F1 and F2) was divided by F0. Typically, the Ca2+-dependent fluorescence signal, ΔF/F0, develops fully within 10–60 ms of hyperpolarization and dissipates equally quickly upon depolarization (Fig. 1, B and C), leaving behind a small, slowly decaying signal that reflects a small increase in global [Ca2+]i (see the following section).

Given that Ca2+ influx through CRAC channels has never been visualized before at a microscopic scale, it is important to confirm that these signals do in fact reflect CRAC channel activity. Currents recorded during these experiments show the inward rectification and dependence on Cao2+ that are typical of ICRAC (Fig. 1 D). Further evidence that the signals are due to CRAC channels comes from pharmacological experiments. The currents and the fluorescence signals evoked by hyperpolarization were both inhibited by La3+ and 2-aminoethyldiphenyl borate (2-APB), known blockers of CRAC channels (Hoth and Penner, 1993; Prakriya and Lewis, 2001; Fig. 2, A and B). Finally, fluorescence changes were minimal in Jurkat CJ-1 cells (Fig. 2 C), a mutant line defective in CRAC channel activity (Fanger et al., 1995). In all cases, the ΔF/F0 signal was strongly correlated with the level of ICRAC measured electrophysiologically, confirming that the fluo-5F fluorescence signals result from Ca2+ entry through CRAC channels.

### Fluo-5F fluorescence monitors local Ca2+ influx near CRAC channels

Several observations provide evidence that fluo-5F monitors predominantly local Ca2+ signals near CRAC channels. First, the rapid rise in ΔF/F0 after membrane hyperpolarization is consistent with the rapid generation of a steady-state [Ca2+]i elevation near open channels, whereas the rapid dissipation of the signal upon depolarization is expected from the kinetics of diffusion out of this microdomain (Klingauf and Neher, 1997). The rapid dissipation of the signal upon depolarization was incomplete; a small residual fraction of the signal (typically <10% of the peak) decayed back to baseline over tens of seconds. This time course is similar to the rate of Ca2+ clearance from Jurkat T cells by the plasma membrane Ca2+-ATPase operating near resting [Ca2+]i (Bautista et al., 2002), suggesting that the residual signal is due to a small rise in global cell [Ca2+]i. Consistent with this interpretation, the residual signal was relatively uniform across the cell, whereas the rapidly changing (local) signal was heterogenous (Figs. 1 B and 3 B).

A second, more stringent test of the ΔF/F0 signal as a local detector of open CRAC channels is to compare the time course of fluorescence and ICRAC as CRAC channels undergo Ca2+-dependent inactivation. Because of the speed of Ca2+ diffusion into the cell, local [Ca2+]i close to channels is expected to vary in proportion to the current amplitude, whereas the global [Ca2+]i should more closely follow the time integral of the current. In response to hyperpolarization, CRAC channels undergo rapid inactivation because of a local effect of incoming Ca2+ (Hoth and Penner, 1993; Zweifach and Lewis, 1995). The size of the current and the speed and extent of inactivation increase as [Ca2+]o is increased from 2 to 20 mM (Fig. 3 A). Simultaneous fluorescence measurements also indicate a rapid decline in ΔF/F0 during the 150-ms hyperpolarization, which is enhanced by increasing [Ca2+]o (Fig. 3, B and C). To compare the time course and amplitude of the current with those of ΔF/F0, we first corrected ΔF/F0 for the buildup of global [Ca2+]i, assuming for simplicity that the global ΔF/F0 component increases linearly during the hyperpolarization. The corrected values of ΔF/F0 are plotted together with the absolute value of the current in Fig. 3 D, with both datasets normalized to a value of 1 at the time of the first image collected at –122 mV in 20 mM Cao2+. The ΔF/F0 signal closely tracks both the time-dependent decline in ICRAC because of inactivation as well as the reduced amplitude of ICRAC at lower [Ca2+]o. These results provide strong confirmation that the rapidly developing component of ΔF/F0 is a valid indicator of local [Ca2+]i near open CRAC channels.

The ability to resolve Ca2+ influx sites is limited by the diffusional spread of Ca2+ bound fluo-5F molecules. This can be measured empirically from the spatial ΔF/F0 profile produced by a point source of Ca2+ influx. Serendipitously, we found that exposure of cells to unattenuated 488-nm laser illumination for >40 s evoked a light-activated increase in a nonselective leak conductance, which was associated with “hotspots” of fluo-5F fluorescence (Fig. 4, A–C). During maintained high-intensity illumination, these hotspots fluctuated, blinking on and off at various locations. These events appeared to be unrelated to CRAC channels, as they were insensitive to 100 μM 2-APB and 10 μM La3+ and arose with similar frequency in control and CRAC-deficient CJ-1 Jurkat cells (unpublished data). The dimensions of the hotspots were relatively uniform, suggesting that they represent influx sites smaller than the overall spatial resolution of our Ca2+-detection system and therefore approximate a point source. The mean intensity profile of the hotspots followed a Gaussian function that decayed by 50% within 377 nm and by 90% within 644 nm (Fig. 4 D). This is significantly broader than the resolution of the microscope optics (the Airy disc decays by 50% within 86 nm), indicating that the measured ΔF/F0 profile is mostly determined by diffusion of Ca2+ and fluo-5F. The spatial spread of the ΔF/F0 signal agrees reasonably well with that predicted by a simple reaction-diffusion model for a point source of Ca2+ flowing into 200 μM fluo-5F and 10 mM EGTA (50% decay within 490 nm; see Materials and methods). Together with the results of Figs. 2 and 3, these data demonstrate that the ΔF/F0 signal can be used to map the location of active CRAC channels in the cell footprint with submicrometer resolution.

### CRAC channels open in close proximity to STIM1 puncta

The spatial relationship between STIM1 puncta and active CRAC channels was determined by simultaneously visualizing STIM1 and Ca2+ influx sites in individual cells. For separation of fluorescently labeled STIM1 and fluo-5F fluorescence, we labeled STIM1 with a monomeric red fluorescent protein (Cherry-STIM1; Shaner et al., 2004). Jurkat cells transfected with Cherry-STIM1 were loaded with fluo-5F and imaged by TIRF microscopy; during the period between break-in and the start of recording, Cherry-STIM1 accumulated in puncta (Fig. 5 D). Upon hyperpolarization to −122 mV, transfected cells exhibited robust Ca2+ influx through CRAC channels (Fig. 5, A and B); to minimize contributions from global [Ca2+]i, fluorescence data were collected only at short times (10–60 ms) after hyperpolarization. The distributions of both Ca2+ influx density and Cherry-STIM1 puncta were nonuniform, with the highest densities of each near the center of the cell footprint (Fig. 5, A and D). To facilitate comparisons of the two maps, contour lines of Ca2+ influx density in pseudocolor are overlaid on the image of Cherry-STIM1 fluorescence in Fig. 5 E. The spatial distributions of Ca2+ influx and Cherry-STIM1 overlap but are not identical. Peaks of influx are not always centered on Cherry-STIM1 puncta, and some Cherry-STIM1 puncta are not associated with peaks of Ca2+ influx (Fig. 5 E). Similar results were obtained in eight other cells. Unfortunately, the close spacing of the puncta complicates interpretation of these images; if clusters of active channels are separated by less than the spatial resolution of the [Ca2+]i measurement (∼400 nm), superposition of their Gaussian fluorescence profiles will generate a maximum signal between the clusters. Because most of the Cherry-STIM1 puncta are separated by <400 nm, individual Ca2+ influx sites cannot be unequivocally assigned to specific puncta.

To clarify more precisely the relationship between STIM1 and active CRAC channels, we sought conditions that would increase the separation of STIM1 puncta. We tried several approaches that were unsuccessful; for example, partial depletion of stores with cyclopiazonic acid reduced the intensity of puncta but not their number. Depolymerization of microtubules with nocodazole caused the ER to coalesce into a clump near the center of the footprint and caused cells to detach from the coverslip (unpublished data). However, the actin depolymerizing agent cytochalasin D, added together with or after thapsigargin (TG), dramatically increased the space between STIM1 puncta. 5 μM cytochalasin D caused Cherry-STIM1 puncta to coalesce into larger structures within several min (Fig. 6 A and Video 1) without affecting footprint adherence as monitored by interference reflection microscopy (IRM; Fig. 6 B). A similar fusion of ER tubules into larger structures was noted in cells expressing ER-targeted fluorescent proteins after exposure to either 5 μM cytochalasin D or 20 μM latrunculin A (unpublished data).

Several independent lines of evidence indicate that cytochalasin D treatment after store depletion preserves the normal CRAC channel activation mechanism in Jurkat cells. First, cytochalasin D did not disrupt the close association of STIM1 puncta with the plasma membrane, as determined at the ultrastructural level using Jurkat cells expressing the HRP-STIM1 fusion protein. Cytochalasin D treatment after store depletion caused HRP-STIM1 to accumulate in ER tubules in close proximity to the plasma membrane (Fig. 6, C–E), similar to what was seen in the absence of the drug (Wu et al., 2006). Second, cytochalasin D did not affect the total near-membrane Cherry-STIM1 fluorescence (Fig. 6 F), suggesting that the drug reorganizes existing STIM1 puncta without altering the amount of STIM1 near the plasma membrane. Finally, ICRAC density was also unaffected by cytochalasin D (Fig. 6 G), showing at a functional level that the drug and the ensuing reorganization of STIM1 puncta leaves the CRAC channel activation mechanism intact.

By reducing the number of puncta, cytochalasin D pretreatment allowed better resolution of the spatial relationship between Cherry-STIM1 and Ca2+ influx sites (Fig. 7, A and B). In seven cells treated in this way, Ca2+ influx sites were all tightly associated with STIM1 puncta, although, as in control cells (Fig. 5), not all puncta were associated with influx (Fig. 7, C and D; and Fig. S1). The spatial profiles of the Ca2+ signal and STIM1 fluorescence were compared for 23 individual influx sites from seven cells, with one example shown in Fig. 7 E. Typically, the width of the ΔF/F0 signal was greater than expected from a single point source (Fig. 4), suggesting that each influx site represents a cluster of open CRAC channels. The spatial profile of the Ca2+ signal was similar to but consistently wider than that of the associated STIM1 punctum. To estimate how much of this difference might be attributable to diffusion of Ca2+ and fluo-5F from CRAC channels, we convolved the STIM1 distribution with a Gaussian function describing the spread of the fluo-5F signal. The resulting curve overlaps quite closely with the observed ΔF/F0 distribution, with the widths of the two curves differing by <200 nm (Fig. 7 E). The similarity of the fluo-5F and convolved STIM1 fluorescence profiles indicates that CRAC channels only open in extremely close proximity to STIM1.

In principle, the local activation of CRAC channels could arise if STIM1 produces a local signal, i.e., one that only activates channels in the immediate vicinity; alternatively, the channels themselves may be confined to the vicinity of STIM1 puncta. Orai1 has recently been identified in several studies as an essential component of the CRAC channel (Feske et al., 2006; Vig et al., 2006; Zhang et al., 2006). To visualize the distribution of CRAC channels relative to STIM1, we transfected cells with Cherry-STIM1 and GFP-myc-Orai1. At rest, there is little overlap between Cherry-STIM1 and GFP-myc-Orai1. TIRF imaging shows that Cherry-STIM1 is localized to the ER, whereas GFP-myc-Orai1 is distributed across the cell footprint (Fig. 8 A). Wide-field epifluorescence images taken through the cell center show that Orai1 in resting cells is diffusely distributed at the cell perimeter and in membrane ruffles, suggesting a location in the plasma membrane (Feske et al., 2006), in marked contrast to the ER distribution of STIM1 (Fig. S2 A). Remarkably, after store depletion, both Cherry-STIM1 and GFP-myc-Orai1 redistribute into a punctate pattern with a high degree of colocalization (Fig. 8 B, right; and Fig. S2 B). Subsequent treatment with cytochalasin D caused puncta to coalesce, and STIM1 and Orai1 remained colocalized (Fig. 8 C), further supporting our conclusion that cytochalasin D reorganizes the CRAC activation machinery without disrupting it. Most important, the accumulation of Orai1 near STIM1 puncta suggests a physical mechanism for the local activation of CRAC channels and Ca2+ influx at these sites. Together, these results reveal the structure and dynamic nature of the elementary unit of SOCE.

## Discussion

Although the activation of store-operated Ca2+ channels by store depletion is well established, the cellular structures and events involved in this process have remained obscure since the first proposal of the capacitative Ca2+ entry hypothesis 20 yr ago. We applied a TIRF-based method for Ca2+ signal localization to determine for the first time the location of active CRAC channels relative to the ER Ca2+ sensor STIM1. Our results show a remarkably close association of open channels with STIM1 puncta that parallels the distribution of Orai1, a component of the CRAC channel, after store depletion. These studies, together with those of Wu et al. (2006), define for the first time the elementary unit of SOCE, consisting of a cluster of STIM1 in the junctional ER membrane locally activating an associated cluster of CRAC channels in the closely apposed plasma membrane.

### A method for mapping the locations of active CRAC channels

To measure local Ca2+ influx through CRAC channels, we adapted a method originally developed to visualize Ca2+ signals from small clusters of active ryanodine receptors and voltage-gated Ca2+ channels in excitable cells (Song et al., 1998; Zenisek et al., 2003). Localizing influx through active CRAC channels is particularly challenging because of their exceedingly small unitary conductance, which is estimated to be >100-fold smaller than that of voltage-gated Ca2+ channels (Zweifach and Lewis, 1993; Prakriya and Lewis, 2002), as well as the small whole-cell CRAC currents they generate in nonexcitable cells (typically <2 pA/pF). As a consequence, we typically observed a ΔF/F0 of only 10–20% in Jurkat cells, compared with the three- to fourfold change reported in neurons and hair cells (Zenisek et al., 2003).

The small Ca2+ signals from CRAC channels made it imperative to distinguish them from other Ca2+ entry pathways using pharmacological blockers and a CRAC-deficient mutant Jurkat cell line (Fig. 2). One example of such a pathway was the nonselective Ca2+-permeable leak conductance that was activated by unattenuated 488-nm light. These influx sites were clearly distinguished from CRAC channels by their insensitivity to 100 μM 2-APB and 10 μM La3+ and their presence in ICRAC-deficient Jurkat mutants. They also appear to be distinct from the light-activated Ca2+-permeable channels reported in other cell types (Mendez and Penner, 1998), which are activated most efficiently at near-UV wavelengths (340–380 nm) and are inhibited >50% by 10 μM La3+. However, despite placing constraints on the maximum laser intensity that could be applied, these light-activated hotspots provided a convenient means of determining the spatial resolution of the Ca2+ imaging technique (Fig. 4), which had dimensions close to those expected from theory (half-widths of 377 and 490 nm, respectively).

### STIM1 activates CRAC channels through a local signaling event

To distinguish between local and global activation of CRAC channels by store depletion, we determined the spatial relationship between STIM1 puncta and open CRAC channels. In Jurkat cells with depleted Ca2+ stores, the density of Ca2+ influx was highest in the vicinity of STIM1 puncta, but there was generally not a well-defined 1:1 relationship between puncta and peaks of influx density. Unfortunately, the spacing of puncta was close enough that summation of neighboring Ca2+ profiles would be predicted to obscure the location of individual Ca2+ influx sites.

We used cytochalasin D as a tool to overcome these problems by reducing the number of STIM1 puncta. In Jurkat cells, cytochalasin D caused STIM1 puncta to coalesce into large, sparsely distributed structures, possibly through the fusion of ER tubules (Fig. 6). Similar effects of cytochalasin D on ER structure have been reported in other cells, but the mechanism is not well understood (Al-Mohanna et al., 1997; Ribeiro et al., 1997). For this reason, it was important to verify that cytochalasin D did not alter the activation mechanism of the CRAC channel in any significant way. Four lines of evidence indicate that cytochalasin D merely reorganizes the CRAC activation components without changing their structural or functional properties (Figs. 6 and 8). The total STIM1 fluorescence measured by TIRF remains constant, indicating that the amount of STIM1 near the membrane is unchanged. Electron microscopy measurements show that junctional ER containing high levels of STIM1 remains intact. Orai1 remains associated with STIM1 puncta during and after cytochalasin D treatment, directly demonstrating that the trigger (STIM1) and the effector (Orai1) of SOCE maintain their spatial relationship relative to each other. Finally, ICRAC itself remains constant during treatment with cytochalasin D, demonstrating at a functional level that the coupling between store depletion and channel activation is preserved. Together, these experiments confirm that the relationship between STIM1 and CRAC channels in Jurkat cells is conserved both structurally and functionally in the presence of cytochalasin D.

It should be noted, however, that the effects on cytochalasin D may be cell specific. As in Jurkat cells, cytochalasin D does not affect the maintenance of SOCE or ICRAC in rat basophilic leukemia, smooth muscle, and corneal epithelial cells, but it has an inhibitory effect in platelets and pancreatic acinar cells (Rosado et al., 2005). An explanation for these differences will require further study but may reflect a varying ability of cytochalasin D to disrupt the coupling between the peripheral ER and the plasma membrane.

In store-depleted cells treated with cytochalasin D, areas of Ca2+ influx were tightly associated with STIM1 puncta (Fig. 7 and Fig. S1). After taking into account the spread of Ca2+ and fluo-5F by diffusion, the overlap between the STIM1 fluorescence and the Ca2+ influx signal is close enough to suggest that STIM1 only activates CRAC channels located in its immediate vicinity. Although all sites of high Ca2+ influx were associated with a STIM1 punctum, a minority of puncta were not paired with a peak of Ca2+ influx. One possibility is that some puncta are not close to a sufficiently high number of CRAC channels to generate detectable Ca2+ influx. Overall, these results show that Ca2+ influx through CRAC channels is not widely dispersed throughout the cell but, rather, is concentrated in specialized subregions that make up a small fraction of the cell surface.

The presence of discrete Ca2+ influx sites provides an effective mechanism for enhancing the specificity of store-operated Ca2+ signals. Ca2+-sensitive adenylate cyclases are known to be activated exclusively or preferentially by SOCE over other influx pathways (Fagan et al., 1996). Similarly, there is evidence that local [Ca2+]i elevation near CRAC channels is a potent modulator of plasma membrane Ca2+-ATPase activity in T cells (Bautista et al., 2002). These studies suggest a close physical coupling of the CRAC channel to specific downstream targets; given the low conductance of the CRAC channel, colocalization with a cluster of CRAC channels at a junctional complex would expose targets to a potent but highly local activation signal, enhancing specificity. It will be interesting in future studies to determine whether these and other Ca2+-dependent proteins are localized to the ER–plasma membrane junctions containing STIM1 and Orai1.

### The elementary unit of SOCE is dynamic

Our results and those of Wu et al. (2006) describe a sequence of early structural and functional steps in the activation of SOCE (Fig. 9). Depletion of Ca2+ stores initiates a series of events, beginning with the redistribution of STIM1 located throughout the ER to its accumulation in regions of junctional ER lying within 10–25 nm of the plasma membrane. New regions of junctional ER also form, and Orai1 accumulates at sites in the plasma membrane directly opposite STIM1. Shortly after the arrival of STIM1 at junctional sites, CRAC channels begin to open in the apposed plasma membrane.

The local activation of CRAC channels in the plasma membrane by STIM1 in the junctional ER defines the elementary unit of SOCE. These contacts are reminiscent of the structurally well-defined dyad and triad junctions between the SR and T-tubule membrane that underlie excitation–contraction coupling in skeletal and cardiac muscle (Cheng et al., 1993; Franzini-Armstrong et al., 1999). In both cases, a protein in one membrane (voltage-gated Ca2+ channel or STIM1) triggers the opening of Ca2+ channels in the opposite membrane (ryanodine receptor or CRAC, respectively), and in both cases the membranes are separated by a gap of only ∼10–20 nm. In muscle cells, activation signals are passed across the gap by either a diffusible messenger (Ca2+ in cardiac myocytes) or conformational coupling between Ca2+ channels and ryanodine receptors (in skeletal muscle). Likewise, CRAC channels could be activated by a diffusible messenger or by direct contact with STIM1, perhaps through coiled-coil interactions of STIM1 and Orai1. However, a fundamental difference between these two systems is that the muscle dyad is a static structure, whereas the SOC junction is labile. Neither STIM1 nor Orai1 reside permanently at junctional sites, unlike the voltage-gated Ca2+ channel and ryanodine receptor of muscle. Rather, the stimulus itself, store depletion, directs the assembly of the SOCE unit in a dynamic manner by triggering the redistribution of STIM1 and Orai1 and inducing their colocalization at junctional sites. This study reveals a novel mode of channel activation, in which both the sensor and the target channel itself must migrate to a common site to interact. The mechanism by which the coordinated translocation of these proteins in two membrane-delimited compartments occurs has yet to be determined.

## Materials And Methods

### Cell lines and reagents

Jurkat E6-1 cells (American Type Culture Collection) and the CJ-1 mutant Jurkat cell line (Fanger et al., 1995) were maintained as described previously (Bautista et al., 2002). 2-APB and cytochalasin D were obtained from Sigma-Aldrich, TG was purchased from LC Laboratories, and fluo-5F was obtained from Invitrogen.

### Plasmids

Cherry-STIM1 plasmid was constructed by inserting mCherry (a gift from R. Tsien, University of California, San Diego, La Jolla, CA) after the signal sequence of human STIM1 (Origene). mCherry was amplified by PCR from mCherry-pRSET-B (Shaner et al., 2004) with primers 5′-ttattaggtaccatggtgagcaagggc-3′ and 5′-ataataggtacccttgtacagctcgtccat-3′ to append KpnI sites onto each end. After KpnI digestion, mCherry was ligated into a unique engineered KpnI site in STIM1 (Quickchange XL kit; Stratagene) at 1188–1193 bp. The HRP-STIM1 plasmid was constructed as described by Wu et al. (2006). N-terminally myc-tagged WT Orai1 (a gift from S. Feske, Harvard Medical School, Boston, MA) in the Gateway entry vector pENTR11 (Feske et al., 2006) was inserted into the Gateway destination vector pDS_GFP-XB by recombination reaction using enzyme mix (Gateway LR Clonase; Invitrogen) to generate GFP-myc-Orai1. For transient transfection, 107 cells were electroporated (Gene Pulser; Bio-Rad Laboratories) with 10 μg plasmid DNA 48–72 h before imaging.

### TIRF microscopy

Cells were allowed to adhere to poly-l-lysine–coated coverslip chambers and were bathed in extracellular solution containing 155 mM NaCl, 4.5 mM KCl, 2 or 20 mM CaCl2, 1 mM MgCl2, 10 mM d-glucose, and 5 mM Na-Hepes, pH 7.4. 0-Ca2+ Ringer's solution was nominally Ca2+ free except in cytochalasin D experiments, when 2 mM MgCl2 plus 1 mM EGTA was added. Illumination at 488 and 514.5 nm was supplied by a 100-mW argon-ion laser (Enterprise 622; Coherent, Inc.) coupled via a single-mode fiber (Point Source) and a TILL-TIRF condenser (Till Photonics) to a microscope (Axiovert 200M; Carl Zeiss MicroImaging, Inc.) equipped with a 100× α-Plan Fluar objective (NA 1.45; Carl Zeiss MicroImaging, Inc.). For 488-nm excitation (fluo-5F and GFP), the filter cube contained a 1.0 neutral density in series with a Z488/10 excitation filter, a Q505LP dichroic mirror, and a HQ535/50M emission filter (all filters were obtained from Chroma Technology Corp.). A 510 LP emission filter was used when imaging fluo-5F in untransfected cells. For 514.5-nm excitation (Cherry-STIM1), the filter cube contained a 0.5 neutral density in series with a HQ535/45 excitation filter, a Q570LP dichroic mirror, and an E610LPV2 emission filter. Neutral densities were omitted when imaging GFP-myc-Orai1 and Cherry-STIM1. Images were acquired with a cooled charge-coupled device camera (ORCA-ER; Hamamatsu). Cherry-STIM1 images were captured with 250–500-ms camera exposures at 2 × 2 camera pixel binning. In GFP-myc-Orai1 and Cherry-STIM1 colocalization experiments, images were captured at 1 × 1 pixel binning 3–4 s apart to allow time for filter cube switching. All imaging functions were controlled by MetaMorph software (Molecular Devices). All experiments were performed at room temperature (22–25°C).

### IRM and electron microscopy

Cells were imaged with epi-illumination at 460 nm using a Polychrome II monochromator (Till Photonics); a 455DCLP allowed collection of 460-nm light reflected at both the glass–solution and solution–cell interfaces. If the distance between these interfaces is <230 nm, an interference pattern is generated where destructive interference is maximal at the smallest separation between the cell and the coverslip (Verschueren, 1985). Electron microscopy was performed as described by Wu et al. (2006).

### Patch-clamp electrophysiology

Patch-clamp experiments were conducted in the standard whole-cell recording configuration as previously described (Zweifach and Lewis, 1995). The standard internal solution contained 140 mM Cs aspartate, 3 mM MgCl2, 10 mM EGTA, 10 mM Hepes, and 0.2 mM fluo-5F, pH 7.3 with CsOH. In Cherry-STIM1 experiments, fluo-5F concentration was reduced to 0.1 mM to minimize contamination of the Cherry fluorescence signal. Currents were filtered at 1 kHz and sampled at 2 kHz without series resistance compensation. Voltage stimuli consisted of a 100-ms step to −122 mV followed by a 100-ms ramp from −122 to +50mV. Unless indicated, all data were leak subtracted using currents collected in nominally Ca2+-free bath solution plus 10 μM LaCl3. Three to four sweeps were averaged for each displayed current.

### Combined imaging and patch-clamp recording

Simultaneous imaging and patch-clamp measurements were performed using in-house software developed on the Igor Pro platform interfaced with an input/output board (ADAC 1300; Molecular Devices) that simultaneously controlled the charge-coupled device camera, the laser shutter, and the amplifier (Axopatch 200B; Molecular Devices). The voltage was alternated between +38 and −122 mV every 150 ms to generate five hyperpolarizing steps. 50-ms camera exposures were collected 10 and 85 ms after each voltage step. Camera pixels were binned to 8 × 8 when imaging fluo-5F in untransfected cells or to 4 × 4 in cells transfected with Cherry-STIM1.

### Data analysis

Image analysis was performed using NIH ImageJ software. All raw fluorescence images were dark-noise subtracted and thresholded to three to four times the remaining background. For fluo-5F experiments, the F0 image was generated by averaging two images collected at +38 mV. F0 was subtracted from each image, and the result was divided by F0 to yield ΔF/F0. Unless indicated, each displayed ΔF/F0 image is a mean derived from four voltage stimulus presentations.

Contour plots were generated using Igor Pro, and pseudocolored surface plots were generated using MatLab (Mathworks). Means are expressed ± SEM. Figures were prepared using Photoshop and Illustrator (Adobe).

### Estimating the spatial resolution of ΔF/F0

The predicted radial spread of Ca2+–fluo-5F from a point source was calculated for 0.2 mM fluo-5F and 10 mM EGTA (Zenisek et al., 2003). As Ca2+ enters the cell, the fraction of Ca2+ bound to fluo-5F (R) depends on the binding rate constants for fluo-5F (kon,fluo-5F = 2.36 × 108 M−1s−1) and EGTA (kon,EGTA = 2.5 × 106 M−1s−1):

$R{=}k_{on,fluo-5F}\left[fluo-5F\right]/\left(k_{on,fluo-5F}\left[fluo-5F\right]{+}k_{on,EGTA}\left[EGTA\right]\right)$

Initially, upon Ca2+ entry, 65% of Ca2+ is bound to fluo-5F. The spread of Ca2+–fluo-5F is determined by the unbinding rate constant for fluo-5F (koff,fluo-5F = 543 s−1) and its diffusion coefficient (Dfluo-5F = 40 μm2/s). On average, fluo-5F will diffuse 379 nm before unbinding Ca2+, and 65% of this released Ca2+ will again be bound by fluo-5F. This reaction–diffusion cycle results in a 50% decay of the Ca2+–fluo-5F signal within 490 nm.

The radial spread of Ca2+–fluo-5F was directly measured from Ca2+ influx hotspots in CJ-1 cells evoked by constant unattenuated 488-nm laser light. 50-ms images were acquired every 150 ms at 2 × 2 pixel binning; two control images were collected at +18 mV, and nine consecutive images were collected at −112 mV. This stimulus was repeated at 10-s intervals until hotspots of light-activated Ca2+ influx were detected.

### Online supplemental material

Fig. S1 shows that active CRAC channels colocalize with STIM1 after cytochalasin D treatment. Fig. S2 shows that STIM1 and Orai1 colocalize after store depletion. Video 1 shows that cytochalasin D reorganizes STIM1 puncta in Jurkat cells.

## Acknowledgments

The authors thank the members of the Lewis Laboratory for helpful discussions during the course of this work, Thomas Karpati for help with MatLab, and Miriam Goodman and Pam Pappone for comments on the manuscript. We would also like to thank Roger Tsien for the gift of mCherry, Stephan Feske for the gift of myc-Orai1, and Franklin Mullins and Chan Young Park for generating the GFP-myc-Orai1 construct.

This work was supported by Stanford Graduate Fellowship and National Institutes of Health training grant GM007276 (to R.M. Luik), National Institutes of Health National Research Service Award postdoctoral training grant 5T32A107290-21 (to M.M. Wu), National Institutes of Health grant GM45374 (to R.S. Lewis), and a gift from the Mathers Charitable Foundation (to R.S. Lewis).

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Abbreviations used in this paper: 2-APB, 2-aminoethyldiphenyl borate; Cao2+, extracellular Ca2+; [Ca2+]i, intracellular free Ca2+ concentration; CRAC, Ca2+ release–activated Ca2+; IRM, interference reflection microscopy; SOC, store-operated channel; SOCE, store-operated Ca2+ entry; SR, sarcoplasmic reticulum; STIM1, stromal interacting molecule 1; TG, thapsigargin; TIRF, total internal reflection fluorescence.