Desmosomes are cell–cell adhesive junctions present in cardiac tissues and epithelial tissues such as the epidermis. These junctions anchor to the intermediate filament cytoskeleton, providing mechanical integrity. Our understanding of desmosome architecture has largely been influenced by observations of two-dimensional images obtained through conventional electron microscopy. Here, using focused ion beam scanning electron microscopy, we report the three-dimensional ultrastructure of desmosomes in A431 epidermoid carcinoma and S1 human mammary epithelial cells. We also reveal differences in desmosome ultrastructure at homotypic and heterotypic junctions of human airway epithelial cells. Quantitative analyses of these datasets reveal variations in desmosome size, shape, and organization. Importantly, we report the presence of discontinuities or “gaps” within the outer dense plaque, a novel feature observed in either one or both desmosome halves. This study provides the first comprehensive description of the epithelial desmosome as a three-dimensional structure and emphasizes the need to investigate the effects of dynamic morphogenetic processes and disease states on desmosome ultrastructure.
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August 05 2026
Volume EM reveals desmosome three-dimensional architecture in epithelial cells and tissue models
Navaneetha Krishnan Bharathan
,
(Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Software, Supervision, Validation, Visualization, Writing - original draft, Writing - review & editing)
1Departments of Dermatology and Cell and Biological Systems,
The Pennsylvania State University College of Medicine
, Hershey, PA, USA
Correspondence to Navaneetha Krishnan Bharathan: [email protected]
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William Giang
,
William Giang
(Data curation, Formal analysis, Software, Writing - review & editing)
1Departments of Dermatology and Cell and Biological Systems,
The Pennsylvania State University College of Medicine
, Hershey, PA, USA
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Eunice C. Chen
,
Eunice C. Chen
(Formal analysis, Writing - original draft, Writing - review & editing)
1Departments of Dermatology and Cell and Biological Systems,
The Pennsylvania State University College of Medicine
, Hershey, PA, USA
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Stephanie E. Zimmer
,
Stephanie E. Zimmer
(Formal analysis, Investigation, Writing - original draft, Writing - review & editing)
1Departments of Dermatology and Cell and Biological Systems,
The Pennsylvania State University College of Medicine
, Hershey, PA, USA
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Sonam Lhamo
,
Sonam Lhamo
(Formal analysis)
1Departments of Dermatology and Cell and Biological Systems,
The Pennsylvania State University College of Medicine
, Hershey, PA, USA
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Danielle M. Jorgens
,
Danielle M. Jorgens
(Data curation, Investigation, Writing - review & editing)
2Electron Microscope Laboratory,
University of California
, Berkeley, CA, USA
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Jamie L. Inman
,
Jamie L. Inman
(Data curation, Investigation, Resources, Writing - review & editing)
3Biological Systems and Engineering Division,
Lawrence Berkeley National Laboratory
, Berkeley, CA, USA
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Vito Mennella
,
Vito Mennella
(Resources, Writing - review & editing)
4Department of Biochemistry,
School of Biological and Behavioural Sciences, Blizard Institute, Queen Mary University of London
, London, UK
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Manfred Auer,
Manfred Auer
(Data curation, Investigation, Resources, Writing - review & editing)
5Molecular Biophysics and Integrated Bioimaging Division,
Lawrence Berkeley National Laboratory
, Berkeley, CA, USA
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Andrew P. Kowalczyk
Andrew P. Kowalczyk
(Funding acquisition, Resources, Writing - review & editing)
1Departments of Dermatology and Cell and Biological Systems,
The Pennsylvania State University College of Medicine
, Hershey, PA, USA
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Navaneetha Krishnan Bharathan
https://orcid.org/0000-0001-8340-5561
Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Software, Supervision, Validation, Visualization, Writing - original draft, Writing - review & editing
1Departments of Dermatology and Cell and Biological Systems,
The Pennsylvania State University College of Medicine
, Hershey, PA, USA
William Giang
https://orcid.org/0000-0003-0829-259X
Data curation, Formal analysis, Software, Writing - review & editing
1Departments of Dermatology and Cell and Biological Systems,
The Pennsylvania State University College of Medicine
, Hershey, PA, USA
Eunice C. Chen
https://orcid.org/0009-0009-7232-6636
Formal analysis, Writing - original draft, Writing - review & editing
1Departments of Dermatology and Cell and Biological Systems,
The Pennsylvania State University College of Medicine
, Hershey, PA, USA
Stephanie E. Zimmer
https://orcid.org/0000-0002-3490-5620
Formal analysis, Investigation, Writing - original draft, Writing - review & editing
1Departments of Dermatology and Cell and Biological Systems,
The Pennsylvania State University College of Medicine
, Hershey, PA, USA
Sonam Lhamo
https://orcid.org/0000-0001-8213-0949
Formal analysis
1Departments of Dermatology and Cell and Biological Systems,
The Pennsylvania State University College of Medicine
, Hershey, PA, USA
Danielle M. Jorgens
https://orcid.org/0000-0002-7143-0118
Data curation, Investigation, Writing - review & editing
2Electron Microscope Laboratory,
University of California
, Berkeley, CA, USA
Jamie L. Inman
https://orcid.org/0000-0002-6056-1219
Data curation, Investigation, Resources, Writing - review & editing
3Biological Systems and Engineering Division,
Lawrence Berkeley National Laboratory
, Berkeley, CA, USA
Vito Mennella
https://orcid.org/0000-0002-4842-9012
Resources, Writing - review & editing
4Department of Biochemistry,
School of Biological and Behavioural Sciences, Blizard Institute, Queen Mary University of London
, London, UK
Manfred Auer
Data curation, Investigation, Resources, Writing - review & editing
5Molecular Biophysics and Integrated Bioimaging Division,
Lawrence Berkeley National Laboratory
, Berkeley, CA, USA
Andrew P. Kowalczyk
https://orcid.org/0000-0001-6438-7863
Funding acquisition, Resources, Writing - review & editing
1Departments of Dermatology and Cell and Biological Systems,
The Pennsylvania State University College of Medicine
, Hershey, PA, USA
Correspondence to Navaneetha Krishnan Bharathan: [email protected]
Disclosures: The authors declare no competing interests exist.
Received:
February 23 2026
Revision Received:
May 21 2026
Accepted:
July 21 2026
Online ISSN: 1540-8140
Print ISSN: 0021-9525
Funding
Funder(s):
National Institutes of Health
- Award Id(s): R01AR048266,R01AR081883
Funder(s):
Children’s Miracle Network Faculty Research
- Award Id(s): 1110000016
Funder(s):
Gordon and Betty Moore Foundation
Funder(s):
Howard Hughes Medical Institute
© 2026 Bharathan et al.
2026
Bharathan et al.
This article is distributed under the terms as described at https://rupress.org/pages/terms102024/.
J Cell Biol (2026) 225 (10): e202602140.
Article history
Received:
February 23 2026
Revision Received:
May 21 2026
Accepted:
July 21 2026
Citation
Navaneetha Krishnan Bharathan, William Giang, Eunice C. Chen, Stephanie E. Zimmer, Sonam Lhamo, Danielle M. Jorgens, Jamie L. Inman, Vito Mennella, Manfred Auer, Andrew P. Kowalczyk; Volume EM reveals desmosome three-dimensional architecture in epithelial cells and tissue models. J Cell Biol 5 October 2026; 225 (10): e202602140. doi: https://doi.org/10.1083/jcb.202602140
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