Granulocyte/macrophage colony-stimulating factor (GM-CSF) is a key cytokine in myelopoiesis and aberrant expression is associated with chronic inflammatory disease and myeloid leukemias. This aberrant expression is often associated with constitutive nuclear factor (NF)-κB activation. To investigate the relationship between NF-κB and GM-CSF transcription in a chromatin context, we analyzed the chromatin structure of the GM-CSF gene in T cells and the role of NF-κB proteins in chromatin remodeling. We show here that chromatin remodeling occurs across a region of the GM-CSF gene between −174 and +24 upon T cell activation, suggesting that remodeling is limited to a single nucleosome encompassing the proximal promoter. Nuclear NF-κB levels appear to play a critical role in this process. In addition, using an immobilized template assay we found that the ATPase component of the SWI/SNF chromatin remodeling complex, brg1, is recruited to the GM-CSF proximal promoter in an NF-κB–dependent manner in vitro. These results suggest that chromatin remodeling across the GM-CSF promoter in T cells is a result of recruitment of SWI/SNF type remodeling complexes by NF-κB proteins binding to the CD28 response region of the promoter.
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17 February 2003
Article|
February 10 2003
Changes in Chromatin Accessibility Across the GM-CSF Promoter upon T Cell Activation Are Dependent on Nuclear Factor κB Proteins
Adele F. Holloway,
Adele F. Holloway
Division of Molecular Bioscience, John Curtin School of Medical Research, Australian National University, ACT 2601, Australia
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Sudha Rao,
Sudha Rao
Division of Molecular Bioscience, John Curtin School of Medical Research, Australian National University, ACT 2601, Australia
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Xinxin Chen,
Xinxin Chen
Division of Molecular Bioscience, John Curtin School of Medical Research, Australian National University, ACT 2601, Australia
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M. Frances Shannon
M. Frances Shannon
Division of Molecular Bioscience, John Curtin School of Medical Research, Australian National University, ACT 2601, Australia
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Adele F. Holloway
Division of Molecular Bioscience, John Curtin School of Medical Research, Australian National University, ACT 2601, Australia
Sudha Rao
Division of Molecular Bioscience, John Curtin School of Medical Research, Australian National University, ACT 2601, Australia
Xinxin Chen
Division of Molecular Bioscience, John Curtin School of Medical Research, Australian National University, ACT 2601, Australia
M. Frances Shannon
Division of Molecular Bioscience, John Curtin School of Medical Research, Australian National University, ACT 2601, Australia
Address correspondence to M. Frances Shannon, Division of Molecular Bioscience, John Curtin School of Medical Research, P.O. Box 334, Canberra ACT 2601, Australia. Phone: 61-(0)2-61259690; Fax: 61-(0)2-61250415; E-mail: [email protected]
A.F. Holloway's present address is Discipline of Biochemistry, University of Tasmania, Hobart 7001, Australia.
*
Abbreviations used in this paper: CHART-PCR, chromatin accessibility by real-time PCR; DH, DNase I hypersensitive.
Received:
June 24 2002
Revision Received:
November 12 2002
Accepted:
December 05 2002
Online ISSN: 1540-9538
Print ISSN: 0022-1007
The Rockefeller University Press
2003
J Exp Med (2003) 197 (4): 413–423.
Article history
Received:
June 24 2002
Revision Received:
November 12 2002
Accepted:
December 05 2002
Citation
Adele F. Holloway, Sudha Rao, Xinxin Chen, M. Frances Shannon; Changes in Chromatin Accessibility Across the GM-CSF Promoter upon T Cell Activation Are Dependent on Nuclear Factor κB Proteins . J Exp Med 17 February 2003; 197 (4): 413–423. doi: https://doi.org/10.1084/jem.20021039
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