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Journal Articles

Early transcriptional effects of inflammatory cytokines reveal highly redundant cytokine networks

Juliana J. Lee, Liang Yang, Jonathan J. Kotzin, Dughan Ahimovic, Michael J. Bale, Peter A. Nigrovic, Steven Z. Josefowicz, Diane Mathis, Christophe Benoist, Immunological Genome Project Consortium

J Exp Med (2025) 222 (4): e20241207.

https://doi.org/10.1084/jem.20241207

Published: 28 January 2025

View article titled, Early transcriptional effects of inflammatory cytokines reveal highly redundant cytokine networks

Includes: Supplementary data

Journal Articles

The interweaved signatures of common-gamma-chain cytokines across immunologic lineages

In Special Collection:

Innate Lymphoid Cells & Unconventional T Cells

Alev Baysoy, Kumba Seddu, Tamara Salloum, Caleb A. Dawson, Juliana J. Lee, Liang Yang, Shani Gal-oz, Hadas Ner-Gaon, Julie Tellier, Alberto Millan, Alexander Sasse, Brian Brown, Lewis L. Lanier, Tal Shay, Stephen Nutt, Daniel Dwyer, Christophe Benoist, The Immunological Genome Project Consortium

J Exp Med (2023) 220 (7): e20222052.

https://doi.org/10.1084/jem.20222052

Published: 28 March 2023

View article titled, The interweaved signatures of common-gamma-chain cytokines across immunologic lineages

Includes: Supplementary data

Journal Articles

Human germline heterozygous gain-of-function STAT6 variants cause severe allergic disease

In Special Collection:

2023: The Year in Experimental Medicine

Mehul Sharma, Daniel Leung, Mana Momenilandi, Lauren C.W. Jones, Lucia Pacillo, Alyssa E. James, Jill R. Murrell, Selket Delafontaine, Jesmeen Maimaris, Maryam Vaseghi-Shanjani, Kate L. Del Bel, Henry Y. Lu, Gilbert T. Chua, Silvia Di Cesare, Oriol Fornes, Zhongyi Liu, Gigliola Di Matteo, Maggie P. Fu, Donato Amodio, Issan Yee San Tam, Gavin Shueng Wai Chan, Ashish A. Sharma, Joshua Dalmann, Robin van der Lee, Géraldine Blanchard-Rohner, Susan Lin, Quentin Philippot, Phillip A. Richmond, Jessica J. Lee, Allison Matthews, Michael Seear, Alexandra K. Turvey, Rachael L. Philips, Terri F. Brown-Whitehorn, Christopher J. Gray, Kosuke Izumi, James R. Treat, Kathleen H. Wood, Justin Lack, Asya Khleborodova, Julie E. Niemela, Xingtian Yang, Rui Liang, Lin Kui, Christina Sze Man Wong, Grace Wing Kit Poon, Alexander Hoischen, Caspar I. van der Made, Jing Yang, Koon Wing Chan, Jaime Sou Da Rosa Duque, Pamela Pui Wah Lee, Marco Hok Kung Ho, Brian Hon Yin Chung, Huong Thi Minh Le, Wanling Yang, Pejman Rohani, Ali Fouladvand, Hassan Rokni-Zadeh, Majid Changi-Ashtiani, Mohammad Miryounesi, Anne Puel, Mohammad Shahrooei, Andrea Finocchi, Paolo Rossi, Beatrice Rivalta, Cristina Cifaldi, Antonio Novelli, Chiara Passarelli, Stefania Arasi, Dominique Bullens, Kate Sauer, Tania Claeys, Catherine M. Biggs, Emma C. Morris, Sergio D. Rosenzweig, John J. O’Shea, Wyeth W. Wasserman, H. Melanie Bedford, Clara D.M. van Karnebeek, Paolo Palma, Siobhan O. Burns, Isabelle Meyts, Jean-Laurent Casanova, Jonathan J. Lyons, Nima Parvaneh, Anh Thi Van Nguyen, Caterina Cancrini, Jennifer Heimall, Hanan Ahmed, Margaret L. McKinnon, Yu Lung Lau, Vivien Béziat, Stuart E. Turvey

J Exp Med (2023) 220 (5): e20221755.

https://doi.org/10.1084/jem.20221755

Published: 08 March 2023

View article titled, Human germline heterozygous gain-of-function STAT6 variants cause severe allergic disease

Includes: Supplementary data

Journal Articles

Multi-omic profiling reveals widespread dysregulation of innate immunity and hematopoiesis in COVID-19

In Special Collection:

Immunology Update Winter 2022 , JEM Immunology Collection 2022 , JEM Stroke Immunology Collection 2022

J Exp Med (2021) 218 (8): e20210582.

https://doi.org/10.1084/jem.20210582

Published: 15 June 2021

View article titled, Multi-omic profiling reveals widespread dysregulation of innate immunity and hematopoiesis in COVID-19

Includes: Supplementary data

Journal Articles

CtIP is essential for early B cell proliferation and development in mice

Xiangyu Liu, Xiaobin S. Wang, Brian J. Lee, Foon K. Wu-Baer, Xiaohui Lin, Zhengping Shao, Verna M. Estes, Jean Gautier, Richard Baer, Shan Zha

J Exp Med (2019) 216 (7): 1648–1663.

https://doi.org/10.1084/jem.20181139

Published: 16 May 2019

View article titled, CtIP is essential for early B cell proliferation and development in mice

Includes: Supplementary data

Journal Articles

Basal mitophagy is widespread in Drosophila but minimally affected by loss of Pink1 or parkin

In Special Collection:

Autophagy 2019 , Cellular Neurobiology 2018 , JCB65: Autophagy

Juliette J. Lee, Alvaro Sanchez-Martinez, Aitor Martinez Zarate, Cristiane Benincá, Ugo Mayor, Michael J. Clague, Alexander J. Whitworth

J Cell Biol (2018) 217 (5): 1613–1622.

https://doi.org/10.1083/jcb.201801044

Published: 02 March 2018

View article titled, Basal mitophagy is widespread in Drosophila but minimally affected by loss of Pink1 or parkin

Includes: Supplementary data

Journal Articles

Correction: Enzymatic lipid oxidation by eosinophils propagates coagulation, hemostasis, and thrombotic disease

J Exp Med (2018) 215 (3): 1003.

https://doi.org/10.1084/jem.2016107002142018c

Published: 20 February 2018

View article titled, Correction: Enzymatic lipid oxidation by eosinophils propagates coagulation, hemostasis, and thrombotic disease

Journal Articles

Enzymatic lipid oxidation by eosinophils propagates coagulation, hemostasis, and thrombotic disease

J Exp Med (2017) 214 (7): 2121–2138.

https://doi.org/10.1084/jem.20161070

Published: 31 May 2017

View article titled, Enzymatic lipid oxidation by eosinophils propagates coagulation, hemostasis, and thrombotic disease

Includes: Supplementary data

Journal Articles

Inflammatory monocytes require type I interferon receptor signaling to activate NK cells via IL-18 during a mucosal viral infection

Amanda J. Lee, Branson Chen, Marianne V. Chew, Nicole G. Barra, Mira M. Shenouda, Tina Nham, Nico van Rooijen, Manel Jordana, Karen L. Mossman, Robert D. Schreiber, Matthias Mack, Ali A. Ashkar

J Exp Med (2017) 214 (4): 1153–1167.

https://doi.org/10.1084/jem.20160880

Published: 06 March 2017

View article titled, Inflammatory monocytes require type I interferon receptor signaling to activate NK cells via IL-18 during a mucosal viral infection

Journal Articles

HCO₃⁻ Secretion by Murine Nasal Submucosal Gland Serous Acinar Cells during Ca²⁺-stimulated Fluid Secretion

Robert J. Lee, Janice M. Harlow, Maria P. Limberis, James M. Wilson, J. Kevin Foskett

J Gen Physiol (2008) 132 (1): 161–183.

https://doi.org/10.1085/jgp.200810017

Published: 30 June 2008

View article titled, HCO3− Secretion by Murine Nasal Submucosal Gland Serous Acinar Cells during Ca2+-stimulated Fluid Secretion

Journal Articles

Allergic pulmonary inflammation in mice is dependent on eosinophil-induced recruitment of effector T cells

Elizabeth A. Jacobsen, Sergei I. Ochkur, Ralph S. Pero, Anna G. Taranova, Cheryl A. Protheroe, Dana C. Colbert, Nancy A. Lee, James J. Lee

J Exp Med (2008) 205 (3): 699–710.

https://doi.org/10.1084/jem.20071840

Published: 03 March 2008

View article titled, Allergic pulmonary inflammation in mice is dependent on eosinophil-induced recruitment of effector T cells

Includes: Supplementary data

Journal Articles

Identification of an alternative Gα_q-dependent chemokine receptor signal transduction pathway in dendritic cells and granulocytes

Guixiu Shi, Santiago Partida-Sánchez, Ravi S. Misra, Michael Tighe, Michael T. Borchers, James J. Lee, Melvin I. Simon, Frances E. Lund

J Exp Med (2007) 204 (11): 2705–2718.

https://doi.org/10.1084/jem.20071267

Published: 15 October 2007

View article titled, Identification of an alternative Gαq-dependent chemokine receptor signal transduction pathway in dendritic cells and granulocytes

Journal Articles

Dissociation of Akt1 from its negative regulator JIP1 is mediated through the ASK1–MEK–JNK signal transduction pathway during metabolic oxidative stress : a negative feedback loop

Jae J. Song, Yong J. Lee

J Cell Biol (2005) 170 (1): 61–72.

https://doi.org/10.1083/jcb.200502070

Published: 05 July 2005

View article titled, Dissociation of Akt1 from its negative regulator JIP1 is mediated through the ASK1–MEK–JNK signal transduction pathway during metabolic oxidative stress : a negative feedback loop

Journal Articles

Early Growth Response Gene 1–mediated Apoptosis Is Essential for Transforming Growth Factor β₁–induced Pulmonary Fibrosis

Chun Geun Lee, Soo Jung Cho, Min Jong Kang, Svetlana P. Chapoval, Patty J. Lee, Paul W. Noble, Teshome Yehualaeshet, Binfeng Lu, Richard A. Flavell, Jeffrey Milbrandt, Robert J. Homer, Jack A. Elias

J Exp Med (2004) 200 (3): 377–389.

https://doi.org/10.1084/jem.20040104

Published: 02 August 2004

View article titled, Early Growth Response Gene 1–mediated Apoptosis Is Essential for Transforming Growth Factor β1–induced Pulmonary Fibrosis

Journal Articles

Granzyme B activates procaspase-3 which signals a mitochondrial amplification loop for maximal apoptosis

Sunil S. Metkar, Baikun Wang, Michelle L. Ebbs, Jin H. Kim, Yong J. Lee, Srikumar M. Raja, Christopher J. Froelich

J Cell Biol (2003) 160 (6): 875–885.

https://doi.org/10.1083/jcb.200210158

Published: 10 March 2003

View article titled, Granzyme B activates procaspase-3 which signals a mitochondrial amplification loop for maximal apoptosis

Journal Articles

Drosophila Aurora A kinase is required to localize D-TACC to centrosomes and to regulate astral microtubules

Régis Giet, Doris McLean, Simon Descamps, Michael J. Lee, Jordan W. Raff, Claude Prigent, David M. Glover

J Cell Biol (2002) 156 (3): 437–451.

https://doi.org/10.1083/jcb.200108135

Published: 04 February 2002

View article titled, Drosophila Aurora A kinase is required to localize D-TACC to centrosomes and to regulate astral microtubules

Journal Articles

Metabolic Consequences of Adenosine Deaminase Deficiency in Mice Are Associated with Defects in Alveogenesis, Pulmonary Inflammation, and Airway Obstruction

Michael R. Blackburn, Jonathan B. Volmer, Janci L. Thrasher, Hongyan Zhong, Jeff R. Crosby, James J. Lee, Rodney E. Kellems

J Exp Med (2000) 192 (2): 159–170.

https://doi.org/10.1084/jem.192.2.159

Published: 10 July 2000

View article titled, Metabolic Consequences of Adenosine Deaminase Deficiency in Mice Are Associated with Defects in Alveogenesis, Pulmonary Inflammation, and Airway Obstruction

Journal Articles

Impaired Antibacterial Host Defense in Mice Lacking the N-formylpeptide Receptor

Ji-Liang Gao, Eric J. Lee, Philip M. Murphy

J Exp Med (1999) 189 (4): 657–662.

https://doi.org/10.1084/jem.189.4.657

Published: 15 February 1999

View article titled, Impaired Antibacterial Host Defense in Mice Lacking the N-formylpeptide Receptor

Journal Articles

Induction of an Antigen-specific, CD1-restricted Cytotoxic T Lymphocyte Response In vivo

Delphine J. Lee, Amila Abeyratne, Dennis A. Carson, Maripat Corr

J Exp Med (1998) 187 (3): 433–438.

https://doi.org/10.1084/jem.187.3.433

Published: 02 February 1998

View article titled, Induction of an Antigen-specific, CD1-restricted Cytotoxic T Lymphocyte Response In vivo

Journal Articles

Interleukin-5 Expression in the Lung Epithelium of Transgenic Mice Leads to Pulmonary Changes Pathognomonic of Asthma

James J. Lee, Michael P. McGarry, Steven C. Farmer, Karen L. Denzler, Kirsten A. Larson, Patricia E. Carrigan, Ina E. Brenneise, Margaret A. Horton, Angela Haczku, Erwin W. Gelfand, George D. Leikauf, Nancy A. Lee

J Exp Med (1997) 185 (12): 2143–2156.

https://doi.org/10.1084/jem.185.12.2143

Published: 16 June 1997

View article titled, Interleukin-5 Expression in the Lung Epithelium of Transgenic Mice Leads to Pulmonary Changes Pathognomonic of Asthma

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Early transcriptional effects of inflammatory cytokines reveal highly redundant cytokine networks

The interweaved signatures of common-gamma-chain cytokines across immunologic lineages

Human germline heterozygous gain-of-function STAT6 variants cause severe allergic disease

Multi-omic profiling reveals widespread dysregulation of innate immunity and hematopoiesis in COVID-19

CtIP is essential for early B cell proliferation and development in mice

Basal mitophagy is widespread in Drosophila but minimally affected by loss of Pink1 or parkin

Correction: Enzymatic lipid oxidation by eosinophils propagates coagulation, hemostasis, and thrombotic disease

Enzymatic lipid oxidation by eosinophils propagates coagulation, hemostasis, and thrombotic disease

Inflammatory monocytes require type I interferon receptor signaling to activate NK cells via IL-18 during a mucosal viral infection

HCO₃⁻ Secretion by Murine Nasal Submucosal Gland Serous Acinar Cells during Ca²⁺-stimulated Fluid Secretion

Allergic pulmonary inflammation in mice is dependent on eosinophil-induced recruitment of effector T cells

Identification of an alternative Gα_q-dependent chemokine receptor signal transduction pathway in dendritic cells and granulocytes

Dissociation of Akt1 from its negative regulator JIP1 is mediated through the ASK1–MEK–JNK signal transduction pathway during metabolic oxidative stress : a negative feedback loop

Early Growth Response Gene 1–mediated Apoptosis Is Essential for Transforming Growth Factor β₁–induced Pulmonary Fibrosis

Granzyme B activates procaspase-3 which signals a mitochondrial amplification loop for maximal apoptosis

Drosophila Aurora A kinase is required to localize D-TACC to centrosomes and to regulate astral microtubules

Metabolic Consequences of Adenosine Deaminase Deficiency in Mice Are Associated with Defects in Alveogenesis, Pulmonary Inflammation, and Airway Obstruction

Impaired Antibacterial Host Defense in Mice Lacking the N-formylpeptide Receptor

Induction of an Antigen-specific, CD1-restricted Cytotoxic T Lymphocyte Response In vivo

Interleukin-5 Expression in the Lung Epithelium of Transgenic Mice Leads to Pulmonary Changes Pathognomonic of Asthma

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