Figure S5.

An interaction between Bin1b and Cavin4b contributes to tubule formation. (A and B) Ultrastructural analysis of 5-dpf WT (A) and cavin4−/− (B) zebrafish embryos. Arrowheads indicate caveolae in WT embryo. Scale bars: 1 µm. (C and D) Live confocal imaging of BHK cells cotransfected with: EGFP-SNX8/Cavin4b-mCherry (C, n = 5 cells imaged) or EGFP-Bin1b/mCherry (D, n = 3 cells imaged each in five independent experiments). Colocalization was analyzed by line scan (as indicated; inset shows line scan area) showing pixel intensity over the line distance (far right panel). Scale bars: 10 µm. (E and F) Scatter plot quantitation of tubule area (E) and average Feret’s diameter (F) of Bin1b-positive tubules in the presence of Cavin4b-mCherry or mCherry reporter during time-lapse imaging over 6 min (n = 5 cells analyzed). Tubule area was normalized to cell size. For E, nested two-tailed t test, area normalized to cell size. For F, two-tailed t test. *, P ≤ 0.05; **, P ≤ 0.01. Error bars represent mean ± SD. (G) Uncropped gels from Fig. 6 B (shown as a multichannel image). Pull-down using GFPtrap with a maltose binding protein tag with in-gel fluorescence detection after semi-denaturing PAGE. Cavin4b-mCherry was coexpressed with Cavin4b-EGFP (positive control), EGFP-Bin1a, EGFP-Bin1b, or EGFP (reporter only negative control) in BHK cells. Protein in starting lysate is shown on left, pull-down using GFPtrap with a maltose binding protein tag is shown on right. Proteins in pull-down fraction appear as a doublet due to binding to maltose. M, molecular weight marker. (H) Schematic of zebrafish Cavin4b protein domains (HR, helical region). Alignment between PRD within DR3 of Cavin4b and the SH3-binding region of CHIKV is shown; proline residues are in red, and positively charged amino acids are highlighted in yellow. (I) Direct association of Bin1b SH3 domain with CHIKV peptide as measured by ITC.

or Create an Account

Close Modal
Close Modal