Figure S5.

Rora expression regulates ILC3 development and function. (A) RORγt expression levels in LineageCD127+RORγt+ ILC3s (n = 3 mice). (B) Representative flow cytometry plots of CD45+LineageIL-25R+ ILC2s in the SI. (C) Quantification of ILC2 numbers in the SI (n = 4–5 mice). (D) UMAP of scRNA-seq of ILC3s in the cecum during intestinal fibrosis, revealing three distinct clusters: DN ILC3s, NCR+ ILC3s, and CCR6+ ILC3s (reanalyzed from Lo et al. [2019a]). (E) UMAP of scRNA-seq depicting ILC3 subsets in RORαsg/sg mice and control littermates. (F) Heatmap showing the frequency of ILC3 subsets differing between RORαsg/sg mice and control littermates during intestinal fibrosis. WT mice refer to Rorafl/fl littermate controls. Data from A and C are representative of two independent experiments. Statistical significance was determined using an unpaired two-tailed t test (*P < 0.05; ns, not significant).

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