Scheme 1.

Schematic of Tuba-seq Ultra vector design and tumor initiation. U6-integrated diverse BC (U6BC) contains a 21-nucleotide region at the 3′ end of the bovine U6 promoter immediately downstream of the TATA box. The sgRNA-Pool/Cre consists of barcoded lenti-sgRNA/Cre vectors that contain three sgRNAs targeting each gene of interest, safe cutting “inert” sgRNAs, and sgRNAs targeting an essential gene. KT;H11LSL-Cas9 are transduced with the lenti- U6BCsgRNA-Pool/Cre. 14–15 wk after tumor initiation, we extract DNA from bulk tumor-bearing lungs and used Tuba-seqUltra to quantify the impact of targeting each regulator on tumor growth, and tumor initiation for each tumor of each genotype.

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