Geometry of the model. (A) Axial cross section through the central region of the cylindrical simulation cell containing the pore. The selectivity filter is the central pore region (R = 3.5 Å, L = 10 Å) confining the oxygen ions of the EEEE locus. The dielectric coefficients are εw = 80 (aqueous regions, light gray) and εp = 10 (protein and membrane regions, white and dark gray). (B and C) Spatial views of the surface grid used in discretizing the dielectric interface at the pore wall, and a snapshot of the eight structural oxygen anions (red) and two cations dwelling in the pore (green, Ca2+; blue, Na+). Ions are represented as charged hard spheres with crystal radii (in Å: Ca2+ 0.99; Ba2+ 1.35; Li+ 0.6; Na+ 0.95; K+ 1.33; Cl− 1.81; O1/2− 1.4).