Figure 6.

Putative farnesyl binding site at the cytoplasmic core of rhodopsin. (A) Structure of light-activated rhodopsin bound to a C-terminal Gt α peptide (yellow; PDB accession no. 3DQB), with the αB and αC helices of EH2 (orange) from Eps15 bound to the STNPFR peptide (blue) manually aligned with TM1 and H8 (reddish-purple) of rhodopsin. (B) Closeup of A showing critical side chains; the NPF containing peptide is a model of how the NPF motif of Gγ may interact with GPCRs. (C) Alignment of three residues, SLE, in the αC helix of EH2 domain with NKQ of H8 in rhodopsin (grey boxes). Interactions of SLE with the STNPFR peptide and NKQ with H5 of Gt α are indicated with black lines. PyMOL was used to determine interactions as contacts <4 Å.

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