Figure 3.

The putative structural model of the Slc26a6 TMDs is similar to the resolved CLC-ec1 TMDs. The putative structure of slc26a6 TMDs was predicted using the 3D-Jury software. (A) The PyMol software was used to generate the model of Slc26a6 TMDs (red/purple) and an overlap with CLC-ec1 crystal structure (yellow). The image on the left shows the dimer configuration, the middle is a magnified image of the TMDs, and the right image is a 90° rotation about the vertical axis. This analysis depicts the high similarity between the TMDs of the two proteins. (B) The predicted position of the Slc26a6 TMD helices. (C) A region within the Slc26a6 TMDs, with a spatial architecture similar to the CLC-ec1 ion-gating domain. The Slc26a6 Y163 and E357 (red) had a putative orientation similar to the CLC-ec1 E148 and Y445 (yellow) that were shown to coordinate Cl binding (Dutzler et al., 2002). Note that the two sites do not fully overlap because they are located in opposite sides of the inverted repeat structures.

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