Figure 3.

Microarray analysis of KLRG1+ ILCs, NKp46+ ILCs, ILC2s, tonsil NKp44 ILC3s, and NKp44+ ILC3s. (A) PCA plot of gene expression as determined by microarray in KLRG1+ ILCs, ILC2s, NKp46+ ILCs, tonsil isolated NKp44 ILC3s, and NKp44+ ILC3s; three donors each). (B) Heatmap of significantly different expressed genes associated with ILC2s and ILC3s. (C) Log2 expression showing the expression values of selected genes. (D) Heatmap of significantly differently expressed genes between KLRG1+ ILCs and ILC2s (left) and log2 expression of HPGDS and CRLF2 (right). (E) Heatmap of expression of genes related to ILC2 exhaustion. (F) Representative histograms of expression of CD62L and CD45RA on KLRG1+ ILCs, NKp46+ ILCs, and ILC2s. (G) Venn diagram showing genes that are up-regulated in NKp46+ ILCs, tonsil NKp44 ILC3s, and tonsil NKp44+ ILC3s. (H) Heatmap of significantly different expressed genes between NKp46+ ILCs, tonsil NKp44 ILC3s, and tonsil NKp44+ ILC3s. Data in F are representative of at least three donors from at least three independent experiments. PC, principal component; HLA-DRA, human leukocyte antigen DR alpha; HLF, hepatic leukemia factor; HPGD, 15-hydroxyprostaglandin dehydrogenase; HPGDS, hematopoietic prostaglandin D synthase; KIT, proto-oncogene, receptor tyrosine kinase; RORA, RAR-related orphan receptor.

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