Characterization of cross-reactive but not cross-neutralizing antibodies. (A) KD for Wuhan-Hu-1 and Gamma RBDs of antibodies from Gamma-infected cohort. Red horizontal bars indicate geometric mean values; no significant difference by two-sided Wilcoxon matched-pairs signed rank test. BLI traces shown in Fig. S2, A and B; mean KD calculated based on triplicate binding curves matching theoretical fit with R2 value ≥ 0.8. (B) Neutralization of Wuhan-Hu-1 pseudovirus by monoclonal antibodies from Wuhan-Hu-1–infected (gray) and Gamma-infected (black) cohorts, summarized as IC50 values. P = 0.0095 by two-sided Mann-Whitney test. (C) Neutralization of Wuhan-Hu-1 (R683G), Gamma (R683G), and Omicron (R683G) pseudovirus by monoclonal antibodies from Gamma-infected cohort, summarized as IC50 values. Lines connect individual antibodies across variants. Dashed line indicates the limit of detection. P = 0.5338 for Wuhan-Hu-1 (R683G) versus Omicron BA.1 (R683G); P = 0.0158 for Wuhan-Hu-1 (R683G) versus Gamma (R683G); and P = 0.0001 for Gamma (R683G) versus Omicron BA.1 (R683G). Statistical significance determined by Friedman’s test followed by Dunn’s multiple comparisons. For A and B, red horizontal bars indicate geometric mean values. Average IC50 values calculated based on duplicate experiments. (D) IC50 values for n = 18 antibodies against indicated mutant SARS-CoV-2 pseudoviruses. Color gradient indicates IC50 values ranging 0 (white) to 1,000 ng/ml (red). Average IC50 values calculated based on duplicate experiments. (E) Schematic of BLI experiment. (F) Bar graph showing percentages of antibodies assigned to each binding class based on BLI epitope binning experiments for n = 28 antibodies each from Wuhan-Hu-1–infected (gray) and Gamma-infected (black) cohorts. Significance (P = 0.0005) determined using Fisher’s test for exact count data.