IVM to study the dynamics of individual cells
| Event | Organ | Probe | Reference |
| Neuronal morphology of hippocampal neurons | Brain | Thy1-GFP mice, dextran | Barretto et al., 2011 |
| Neuronal circuitry | Brain | Brainbow mice | Livet et al., 2007 |
| Dendritic spine development in the cortex | Brain | YFP H-line mice | Pan and Gan, 2008 |
| Calcium imaging in the brain | Brain | GCAMP | Zariwala et al., 2012 |
| Natural killer cell and cytotoxic T cell interactions with tumors | Xenograft | mCFP , mYFP | Deguine et al., 2010 |
| Neutrophil recruitment in beating heart | Heart | Dextran, CX3CR1-GFP mice | Li et al., 2012 |
| Immune cells in the central nervous system | Brain | Dextran, CX3CR1-GFP, LysM-GFP and CD11c-YFP mice | Nayak et al., 2012 |
| Dendritic cells migration | Skin | YFP, VE-caherin RFP mice, dextran | Nitschké et al., 2012 |
| CD8+ T cells interaction with dendritic cells during viral infection | Lymph nodes | EGFP, Dextran, SHG | Hickman et al., 2008 |
| B cells and dendritic cells interactions outside lymph nodes | Lymph nodes | EGFP | Qi et al., 2006 |
| Change in gene expression during metastasis | Xenograft | Pinner et al., 2009 | |
| Invasion and metastasis in head and neck cancer | Xenograft | YFP, RFP-lifeact, dextran | Amornphimoltham et al., 2013 |
| Fibrosarcoma cell migration along collagen fibers | Dorsal skin chamber | SHG, EGFP, DsRed, Dextran | Alexander et al., 2008 |
| Long term imaging mammary tumors and photo-switchable probes | Mammary window | Dendra-2 | Kedrin et al., 2008; Gligorijevic et al., 2009 |
| Long term imaging liver metastasis through abdominal window | Liver | SHG, Dendra2, EGFP | Ritsma et al., 2012b |
| Macrophages during intravasation in mammary tumors | Xenograft | EGFP, SHG, dextrans | Wang et al., 2007; Wyckoff et al., 2007 |
| Melanoma collective migration | Dorsal skin Chamber | SHG, THG, EGFP, Dextran | Weigelin et al., 2012 |
| Hematopoietic stem cells and blood vessel | Skullcup | Dextran | Lo Celso et al., 2009 |
| Epithelial stem cells during hair regeneration | Skin | H2B-GFP mice | Rompolas et al., 2012 |
| Event | Organ | Probe | Reference |
| Neuronal morphology of hippocampal neurons | Brain | Thy1-GFP mice, dextran | Barretto et al., 2011 |
| Neuronal circuitry | Brain | Brainbow mice | Livet et al., 2007 |
| Dendritic spine development in the cortex | Brain | YFP H-line mice | Pan and Gan, 2008 |
| Calcium imaging in the brain | Brain | GCAMP | Zariwala et al., 2012 |
| Natural killer cell and cytotoxic T cell interactions with tumors | Xenograft | mCFP , mYFP | Deguine et al., 2010 |
| Neutrophil recruitment in beating heart | Heart | Dextran, CX3CR1-GFP mice | Li et al., 2012 |
| Immune cells in the central nervous system | Brain | Dextran, CX3CR1-GFP, LysM-GFP and CD11c-YFP mice | Nayak et al., 2012 |
| Dendritic cells migration | Skin | YFP, VE-caherin RFP mice, dextran | Nitschké et al., 2012 |
| CD8+ T cells interaction with dendritic cells during viral infection | Lymph nodes | EGFP, Dextran, SHG | Hickman et al., 2008 |
| B cells and dendritic cells interactions outside lymph nodes | Lymph nodes | EGFP | Qi et al., 2006 |
| Change in gene expression during metastasis | Xenograft | Pinner et al., 2009 | |
| Invasion and metastasis in head and neck cancer | Xenograft | YFP, RFP-lifeact, dextran | Amornphimoltham et al., 2013 |
| Fibrosarcoma cell migration along collagen fibers | Dorsal skin chamber | SHG, EGFP, DsRed, Dextran | Alexander et al., 2008 |
| Long term imaging mammary tumors and photo-switchable probes | Mammary window | Dendra-2 | Kedrin et al., 2008; Gligorijevic et al., 2009 |
| Long term imaging liver metastasis through abdominal window | Liver | SHG, Dendra2, EGFP | Ritsma et al., 2012b |
| Macrophages during intravasation in mammary tumors | Xenograft | EGFP, SHG, dextrans | Wang et al., 2007; Wyckoff et al., 2007 |
| Melanoma collective migration | Dorsal skin Chamber | SHG, THG, EGFP, Dextran | Weigelin et al., 2012 |
| Hematopoietic stem cells and blood vessel | Skullcup | Dextran | Lo Celso et al., 2009 |
| Epithelial stem cells during hair regeneration | Skin | H2B-GFP mice | Rompolas et al., 2012 |