Table I.

Mass spectrometry analysis of ECM proteins deposited by MCF-10A cells

Gene symbol Protein name Amino acid residues Mascot scorea Number of total peptides detected 
LAMA3 Laminin subunit α3 chain (laminin-5 α3 subunit) 1713 715 113 
LAMB3 Laminin subunit β3 chain (laminin-5 β3 subunit) 1170 441 69 
LAMC2 Laminin subunit γ2 chain (laminin-5 γ2 subunit) 1193 388 106 
LAMB1 Laminin subunit β1 chain 1786 79 
LAMC1 Laminin subunit γ1 chain 1609 96 
AGRN Agrin 2026 67 
CYR61 CYR61 (cysteine-rich angiogenic inducer 61) 381 64 
THBS1 Thrombospondin 1 (THBS1) 1170 135 
VCAN Versican, proteoglycan PG-M (V3) 655 47 
FGB Fibrinogen, β chain 483 49 
Gene symbol Protein name Amino acid residues Mascot scorea Number of total peptides detected 
LAMA3 Laminin subunit α3 chain (laminin-5 α3 subunit) 1713 715 113 
LAMB3 Laminin subunit β3 chain (laminin-5 β3 subunit) 1170 441 69 
LAMC2 Laminin subunit γ2 chain (laminin-5 γ2 subunit) 1193 388 106 
LAMB1 Laminin subunit β1 chain 1786 79 
LAMC1 Laminin subunit γ1 chain 1609 96 
AGRN Agrin 2026 67 
CYR61 CYR61 (cysteine-rich angiogenic inducer 61) 381 64 
THBS1 Thrombospondin 1 (THBS1) 1170 135 
VCAN Versican, proteoglycan PG-M (V3) 655 47 
FGB Fibrinogen, β chain 483 49 

Factors indicated by boldface are laminin-5 components. MCF-10Aeco cells grown in serum-free MEGM were detached from culture plates with PBS containing 10 mM EDTA. The proteins remaining on the plates were lysed in SDS sample buffer, separated by SDS-PAGE, and analyzed by mass spectrometry. Only ECM proteins with clear mass spectra with scores of P < 0.05 are listed. Laminin-5 subunits are detected as the major ECM components of MCF-10Aeco cells.

a

Significance threshold of proteins was set at P < 0.05.

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