Table 2. Oligonucleotides (siRNA; shRNA)... | Rockefeller University Press

Table 2.

Oligonucleotides (siRNA; shRNA) used in this study

Name	Source	Code
shRNA LMX1A #1	Sigma-Aldrich	TRCN0000017217
shRNA LMX1A #2^{^a}	Sigma-Aldrich	TRCN0000017215
shRNA LMX1B #1	Sigma-Aldrich	TRCN0000017514
shRNA LMX1B #2^{^a}	Sigma-Aldrich	TRCN0000017517
Mission PLKO.1-puro non-targeting shRNA	Sigma-Aldrich	SHC002
siLMX1B SMARTpool	Dharmacon	L-012586
MISSION esiRNA esiRNA targeting human MAP1LC3B	Sigma-Aldrich	EHU002651
MISSION esiRNA esiRNA targeting human GABARAP-L1	Sigma-Aldrich	EHU107971
MISSION esiRNA esiRNA targeting human LC3A	Sigma-Aldrich	EHU088371
siLuciferase (siControl): 5′-CGUACGCGGAAUACUUCGAUU-3′	Eurofins	N/A

Name	Source	Code
shRNA LMX1A #1	Sigma-Aldrich	TRCN0000017217
shRNA LMX1A #2^a	Sigma-Aldrich	TRCN0000017215
shRNA LMX1B #1	Sigma-Aldrich	TRCN0000017514
shRNA LMX1B #2^a	Sigma-Aldrich	TRCN0000017517
Mission PLKO.1-puro non-targeting shRNA	Sigma-Aldrich	SHC002
siLMX1B SMARTpool	Dharmacon	L-012586
MISSION esiRNA esiRNA targeting human MAP1LC3B	Sigma-Aldrich	EHU002651
MISSION esiRNA esiRNA targeting human GABARAP-L1	Sigma-Aldrich	EHU107971
MISSION esiRNA esiRNA targeting human LC3A	Sigma-Aldrich	EHU088371
siLuciferase (siControl): 5′-CGUACGCGGAAUACUUCGAUU-3′	Eurofins	N/A

Provided the most effective knockdown and were therefore used for shRNA experiments throughout the study.