Table 1. SCAR and WASP orthologues for... | Rockefeller University Press

Table 1.

SCAR and WASP orthologues for indicated species (Kollmar et al., 2012) for protein sequences (except for orthologues in Sarracenia rosea, which we identified via BLAST, NCBI identifiers indicated). See also Fig. 8.

Species	Group	SCAR	WASP	Pseudopod reference
H. sapiens	Animals (opisthokont)	WAVE1, WAVE2, WAVE3	WASP, N-WASP	Ramsey, 1972
M. brevicollis (orthologues in S. rosea)	Choanoflagellate (opisthokont)	MbWAVE (S. rosea: XP_004994362)	MbWASP (S. rosea: XP_004997564)	Pseudopod-based feeding has been observed in all choanoflagellate families (Pettitt et al., 2002); for detailed analysis of pseudopods of S. rosea see Dayel and King, 2014
C. owczarzaki	Opisthokont	CoWAVE	CoWASP	Hertel et al., 2002
A. nidulans (Representative dikaryon)	Fungi (opisthokont)	n.f.	EnWASP	n.f.
B. dendrobatidis	Fungi (opisthokont)	Bad_bWAVE	Bad_bWASP	this work
A. macrogynus	Fungi (opisthokont)	AlmWAVE	AlmWASP_Aα, AlmWASP_Aβ, AlmWASP_Bα, AlmWASPB_β	n.f.
D. discoideum	Amoebozoan	SCAR1	DdWASP	Raper, 1935
E. histolytica	Amoebozoan	n.f.	n.f.	n.f.
A. castellanii	Amoebozoan	AcWAVE	AcWASP_A, AcWASP_B, AcWASP_C	Bowers and Korn, 1968
T. trahens++	Apusozoa	TctWAVE	TctWASP	Cavalier-Smith and Chao, 2010
A. thaliana	Plant	SCAR1, SCAR2, SCAR3, SCAR4, SCAR-like domain-containing protein	n.f.	n.f.
P. ramorum	Stramenopile (SAR)	n.f.	n.f.	n.f.
B. natans	Rhizarian (SAR)	n.f.	BinWASP_A, BinWASP_B	n.f.
P. falciparum	Alveolate (SAR)	n.f.	n.f.	n.f.
T. thermophila	Alveolate (SAR)	n.f.	TtWASP_A, TtWASP_B	n.f.
E. huxleyi	Haptophyte	n.f.	EmhWasp	n.f.
N. gruberi	Heterolobosean	NgWAVE_A, NgWAVE_B	NgWASP_A, NgWASP_B, NgWASP_C, NgWASP_D	Fulton, 1970
G. lamblia	Diplomonad	n.f.	n.f.	n.f.
T. vaginalis	Parabasalid	Tv_aWAVE_A, Tv_aWAVE_B, Tv_aWAVE_C, Tv_aWAVE_D, Tv_aWAVE_E, Tv_aWAVE_F, Tv_aWAVE_G, Tv_aWAVE_H, Tv_aWAVE_I, Tv_aWAVE_J, Tv_aWAVE_K	Tv_aWasp_A, Tv_aWasp_B	Kusdian et al., 2013

Species	Group	SCAR	WASP	Pseudopod reference
H. sapiens	Animals (opisthokont)	WAVE1, WAVE2, WAVE3	WASP, N-WASP	Ramsey, 1972
M. brevicollis (orthologues in S. rosea)	Choanoflagellate (opisthokont)	MbWAVE (S. rosea: XP_004994362)	MbWASP (S. rosea: XP_004997564)	Pseudopod-based feeding has been observed in all choanoflagellate families (Pettitt et al., 2002); for detailed analysis of pseudopods of S. rosea see Dayel and King, 2014
C. owczarzaki	Opisthokont	CoWAVE	CoWASP	Hertel et al., 2002
A. nidulans (Representative dikaryon)	Fungi (opisthokont)	n.f.	EnWASP	n.f.
B. dendrobatidis	Fungi (opisthokont)	Bad_bWAVE	Bad_bWASP	this work
A. macrogynus	Fungi (opisthokont)	AlmWAVE	AlmWASP_Aα, AlmWASP_Aβ, AlmWASP_Bα, AlmWASPB_β	n.f.
D. discoideum	Amoebozoan	SCAR1	DdWASP	Raper, 1935
E. histolytica	Amoebozoan	n.f.	n.f.	n.f.
A. castellanii	Amoebozoan	AcWAVE	AcWASP_A, AcWASP_B, AcWASP_C	Bowers and Korn, 1968
T. trahens++	Apusozoa	TctWAVE	TctWASP	Cavalier-Smith and Chao, 2010
A. thaliana	Plant	SCAR1, SCAR2, SCAR3, SCAR4, SCAR-like domain-containing protein	n.f.	n.f.
P. ramorum	Stramenopile (SAR)	n.f.	n.f.	n.f.
B. natans	Rhizarian (SAR)	n.f.	BinWASP_A, BinWASP_B	n.f.
P. falciparum	Alveolate (SAR)	n.f.	n.f.	n.f.
T. thermophila	Alveolate (SAR)	n.f.	TtWASP_A, TtWASP_B	n.f.
E. huxleyi	Haptophyte	n.f.	EmhWasp	n.f.
N. gruberi	Heterolobosean	NgWAVE_A, NgWAVE_B	NgWASP_A, NgWASP_B, NgWASP_C, NgWASP_D	Fulton, 1970
G. lamblia	Diplomonad	n.f.	n.f.	n.f.
T. vaginalis	Parabasalid	Tv_aWAVE_A, Tv_aWAVE_B, Tv_aWAVE_C, Tv_aWAVE_D, Tv_aWAVE_E, Tv_aWAVE_F, Tv_aWAVE_G, Tv_aWAVE_H, Tv_aWAVE_I, Tv_aWAVE_J, Tv_aWAVE_K	Tv_aWasp_A, Tv_aWasp_B	Kusdian et al., 2013

Example references for observations of pseudopods are given. Cases where genes or references to cells with active pseudopods were not found are indicated by “n.f.” See also Fig. 8.

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