Table 1.

Antimicrobial prevention in IEI

IEI/Disease processAntimicrobial regimensComments
SCID TMP/SMX for PJP prophylaxis starting at 1 mo; second line agents include pentamidine, atovaquone, and dapsone
Fluconazole for Candida prophylaxis
Antivirals dependent on risks (2)
RSV monoclonal antibody seasonally
IgRT within a few weeks of life, trough levels >800 mg/dl 
Monitor bilirubin and blood counts on TMP/SMX
Folinic acid to minimize cytopenias
Monitor liver function tests on fluconazole
Avoid breastfeeding if mother CMV IgG positive
Irradiated blood products
Avoid live vaccines (rotavirus, MMR, varicella, and BCG) 
CGD TMP/SMX twice daily for bacterial prophylaxis
Itraconazole for fungal prophylaxis; other mold-active triazoles as alternative include posaconazole
Consideration of IFNγ 
Remember corticosteroid/azole interaction
Environmental considerations to minimize mold/water exposures
Diagnosis of lung infections preferably with biopsy
Some infections (i.e., Nocardia pneumonias, S. aureus liver abscess) have better response if corticosteroids added to antimicrobials 
HIES TMP/SMX twice daily for bacterial prophylaxis (consider alternatives such as doxycycline if resistant organisms)
Fluconazole for frequent Candida infections and in Coccidioides endemic regions
Itraconazole if pneumatocele is present, posaconazole if chronic mold infection
Consider IgRT 
Avoid lung surgeries and lung biopsies if possible due to risk of prolonged bronchopleural fistulae
Consider dupilumab for eczematoid dermatitis; can also reduce skin infections
Antiseptics (dilute bleach baths, chlorhexidine) to minimize S. aureus skin colonization
Low threshold to look for infection as systemic signs of inflammation are diminished 
XLA IgRT with optimization of trough
Consider azithromycin
Influenza and SARS CoV2 vaccination can maximize responses through T cell–dependent mechanisms 
Low threshold to consider Campylobacter/Helicobacter with persistent fevers, lower extremity erythema/bruise-like and boggy skin changes
Low threshold to look for chronic enterovirus with CNS symptoms Consider Aichi virus with nephritis, hepatitis 
Bronchiectasis Consider azithromycin after sputum cultures for Mycobacteria
Airway clearance techniques
Consider of inhaled antimicrobials 
Check EKG for QTc with addition of azithromycin and consider hearing screen
Periodic sputum cultures to be aware of colonization and optimal antimicrobials if needed
Caution with inhaled tobramycin if renal insufficiency 
MSMD Prophylaxis with azithromycin after NTM infections treated
Consideration of IFNγ for treatment in addition to antimicrobials with certain defects (IL12RB1 deficiency, AD IFNγR1 deficiency, NEMO, and IkBα) 
Avoid BCG vaccination
For complete IFNγR deficiencies, after control of NTM with combination antimicrobials, HSCT is indicated
Some risk of endemic mycoses, therefore minimize environmental exposures and in Coccidioides endemic regions consider prophylactic azoles 
Perioperative Consideration of S. aureus therapies perioperatively with longer course if hardware placed (7–10 days) S. aureus decolonization with nasal mupirocin, antiseptics 
Women’s health Many restrictions of antimicrobials during pregnancy—consider azithromycin for prophylaxis and topical antifungals if needed Close communication with Obstetrician and IEI practitioner 
IEI/Disease processAntimicrobial regimensComments
SCID TMP/SMX for PJP prophylaxis starting at 1 mo; second line agents include pentamidine, atovaquone, and dapsone
Fluconazole for Candida prophylaxis
Antivirals dependent on risks (2)
RSV monoclonal antibody seasonally
IgRT within a few weeks of life, trough levels >800 mg/dl 
Monitor bilirubin and blood counts on TMP/SMX
Folinic acid to minimize cytopenias
Monitor liver function tests on fluconazole
Avoid breastfeeding if mother CMV IgG positive
Irradiated blood products
Avoid live vaccines (rotavirus, MMR, varicella, and BCG) 
CGD TMP/SMX twice daily for bacterial prophylaxis
Itraconazole for fungal prophylaxis; other mold-active triazoles as alternative include posaconazole
Consideration of IFNγ 
Remember corticosteroid/azole interaction
Environmental considerations to minimize mold/water exposures
Diagnosis of lung infections preferably with biopsy
Some infections (i.e., Nocardia pneumonias, S. aureus liver abscess) have better response if corticosteroids added to antimicrobials 
HIES TMP/SMX twice daily for bacterial prophylaxis (consider alternatives such as doxycycline if resistant organisms)
Fluconazole for frequent Candida infections and in Coccidioides endemic regions
Itraconazole if pneumatocele is present, posaconazole if chronic mold infection
Consider IgRT 
Avoid lung surgeries and lung biopsies if possible due to risk of prolonged bronchopleural fistulae
Consider dupilumab for eczematoid dermatitis; can also reduce skin infections
Antiseptics (dilute bleach baths, chlorhexidine) to minimize S. aureus skin colonization
Low threshold to look for infection as systemic signs of inflammation are diminished 
XLA IgRT with optimization of trough
Consider azithromycin
Influenza and SARS CoV2 vaccination can maximize responses through T cell–dependent mechanisms 
Low threshold to consider Campylobacter/Helicobacter with persistent fevers, lower extremity erythema/bruise-like and boggy skin changes
Low threshold to look for chronic enterovirus with CNS symptoms Consider Aichi virus with nephritis, hepatitis 
Bronchiectasis Consider azithromycin after sputum cultures for Mycobacteria
Airway clearance techniques
Consider of inhaled antimicrobials 
Check EKG for QTc with addition of azithromycin and consider hearing screen
Periodic sputum cultures to be aware of colonization and optimal antimicrobials if needed
Caution with inhaled tobramycin if renal insufficiency 
MSMD Prophylaxis with azithromycin after NTM infections treated
Consideration of IFNγ for treatment in addition to antimicrobials with certain defects (IL12RB1 deficiency, AD IFNγR1 deficiency, NEMO, and IkBα) 
Avoid BCG vaccination
For complete IFNγR deficiencies, after control of NTM with combination antimicrobials, HSCT is indicated
Some risk of endemic mycoses, therefore minimize environmental exposures and in Coccidioides endemic regions consider prophylactic azoles 
Perioperative Consideration of S. aureus therapies perioperatively with longer course if hardware placed (7–10 days) S. aureus decolonization with nasal mupirocin, antiseptics 
Women’s health Many restrictions of antimicrobials during pregnancy—consider azithromycin for prophylaxis and topical antifungals if needed Close communication with Obstetrician and IEI practitioner 

or Create an Account

Close Modal
Close Modal