Yeast strains used in this study
| Strain | Description |
| WT | NCYC495 ura3 leu1.1 (Sudbery et al., 1988) |
| WT DsRed-T1-SKL | WT with pHIPZ4-DsRed-T1-SKL, leu1.1 (Monastyrska et al., 2005) |
| pex11 | PEX11 deletion, leu1.1 (Krikken et al., 2009) |
| pex11.GFP-SKL | pex11 with pHIPZ4-GFP-SKL (Nagotu et al., 2008b) |
| pex25 | PEX25 deletion, leu1.1, ura3 |
| pex25.DsRed-SKL | pex25 with pHIPZ4-DsRed-T1-SKL |
| WT.Pex11-GFP | WT with pEXP-PEX11-GFP |
| WT.Pex25-GFP | WT with pMCE1 |
| WT.Pex11C-GFP | WT with pAMK24 |
| pex11C | PEX11C deletion, leu1.1, ura3 |
| pex11C. DsRed-SKL | pex11C with pHIPZ4-DsRed-T1-SKL |
| pex11 pex25 | PEX11 PEX25 double deletion strain |
| pex11 pex25.DsRed-SKL | pex11 pex25 with pHIPZ4-DsRed-T1-SKL |
| pex11 pex25.Pex3-GFP | pex11 pex25 with pHOR46 |
| pex11 pex25.Pex11-mCherry | pex11 pex25 with pRSA022 |
| pex11 pex25.Pex11-mCherry Pex3-GFP | pex11 pex25 with pRSA022 and pHOR46 |
| pex11 pex25.Pex11-mCherry.BiPN30-GFP-HDEL | pex11 pex25 with pRSA022 and pHIPX4-BiPN30-GFP-HDEL |
| pex11 pex25.Pex11-mCherry.GFP-SKL | pex11 pex25 with pRSA022 and pHIPX4-GFP-SKL |
| pex11 pex25.Pex25-mCherry | pex11 pex25 with pRSA08 |
| pex11 pex25.Pex25-mCherry Pex3-GFP | pex11 pex25 with pRSA08 and pHOR46 |
| pex11 pex25.Pex25-mCherry.BiPN30-GFP-HDEL | pex11 pex25 with pRSA08 and pHIPX4-BiPN30-GFP-HDEL |
| pex11 pex25.Pex25-mCherry.GFP-SKL | pex11 pex25 with pRSA08 and pHIPX4-GFP-SKL |
| pex11 pex11C | PEX11 PEX11C double deletion strain |
| pex11 pex11C.DsRed-SKL | pex11 pex11C with pHIPZ4-DsRed-T1-SKL |
| pex25 pex11C | PEX25 PEX11C double deletion strain |
| pex25 pex11C.DsRed-SKL | pex25 pex11C with pHIPZ4-T1-DsRed-SKL |
| pex11.Pex11-mCherry | pex11 with pRSA03 |
| pex3 pex11 | PEX3 PEX11 double deletion strain |
| pex3 pex11.Pex3-GFP | pex3 pex11 with pHIPZ5-Pex3-GFP |
| pex3 pex11.Pex11-mCherry | pex3 pex11 with pRSA03 |
| pex3 pex11.Pex11-mCherry.BiPN30-GFP-HDEL | pex3 pex11.Pex11-mCherry with pRSA017 |
| pex3.Pex25-mCherry.BiPN30-GFP-HDEL | pex3 deletion strain with pRSA06 and pRSA017 |
| pex3.Pex3-GFP | PEX3 deletion with pHIPZ5-Pex3-GFP (Nagotu et al., 2008b) |
| pex3 | PEX3 deletion strain, ura3 (Baerends et al., 1996) |
| pex3 pex25 | PEX3 PEX25 double deletion strain |
| pex3 pex25.Pex3-GFP | pex3 pex25 with pHIPZ5-Pex3-GFP |
| pex3 pex11C | PEX3 PEX11C double deletion strain |
| pex3 pex11C.Pex3-GFP | pex3 pex11C with pHIPZ5-Pex3-GFP |
| pex3 pex11 pex25 | PEX3 PEX11 PEX25 triple deletion strain |
| pex3. BiPN30Pex3-mCherry | PEX3 deletion with pEXP-BiPN30-PEX3-mCherry |
| pex3 pex11.BiPN30Pex3-mCherry | PEX3 PEX11 deletion with pEXP-BiPN30-PEX3-mCherry |
| pex3 pex25.BiPN30Pex3-mCherry | PEX3 PEX25 deletion with pEXP-BiPN30-PEX3-mCherry |
| pex3 pex11 pex25.BiPN30Pex3-mCherry | PEX3 PEX11 PEX25 deletion with pEXP-BiPN30-PEX3-mCherry |
| L-40 S. cerevisiae | MATa leu2 his3 trp1 ade2 GAL4 gal80 LYS2::(lexAop)4-HIS3 URA3::(lexAop)s-lacZ (Takara Bio Inc.) |
| WT.GFP-Rho1 | WT with pEXP-GFPRho1 |
| WT.GFP-Rho1 DsRed-SKL | WT with pEXP-GFPRho1 and pSNA03 |
| pex11 pex25 RHO1tsPex25-mCherry | PEX11 PEX25 double deletion with pHIPH-Rho1 and pRSA08 |
| pex3 N50.Pex3-GFP | PEX3 deletion with N50.Pex3-GFP (Faber et al., 2002a) |
| pex3 RHO1tsN50.Pex3-GFP | PEX3 deletion with N50.Pex3-GFP with RHO1ts |
| Strain | Description |
| WT | NCYC495 ura3 leu1.1 (Sudbery et al., 1988) |
| WT DsRed-T1-SKL | WT with pHIPZ4-DsRed-T1-SKL, leu1.1 (Monastyrska et al., 2005) |
| pex11 | PEX11 deletion, leu1.1 (Krikken et al., 2009) |
| pex11.GFP-SKL | pex11 with pHIPZ4-GFP-SKL (Nagotu et al., 2008b) |
| pex25 | PEX25 deletion, leu1.1, ura3 |
| pex25.DsRed-SKL | pex25 with pHIPZ4-DsRed-T1-SKL |
| WT.Pex11-GFP | WT with pEXP-PEX11-GFP |
| WT.Pex25-GFP | WT with pMCE1 |
| WT.Pex11C-GFP | WT with pAMK24 |
| pex11C | PEX11C deletion, leu1.1, ura3 |
| pex11C. DsRed-SKL | pex11C with pHIPZ4-DsRed-T1-SKL |
| pex11 pex25 | PEX11 PEX25 double deletion strain |
| pex11 pex25.DsRed-SKL | pex11 pex25 with pHIPZ4-DsRed-T1-SKL |
| pex11 pex25.Pex3-GFP | pex11 pex25 with pHOR46 |
| pex11 pex25.Pex11-mCherry | pex11 pex25 with pRSA022 |
| pex11 pex25.Pex11-mCherry Pex3-GFP | pex11 pex25 with pRSA022 and pHOR46 |
| pex11 pex25.Pex11-mCherry.BiPN30-GFP-HDEL | pex11 pex25 with pRSA022 and pHIPX4-BiPN30-GFP-HDEL |
| pex11 pex25.Pex11-mCherry.GFP-SKL | pex11 pex25 with pRSA022 and pHIPX4-GFP-SKL |
| pex11 pex25.Pex25-mCherry | pex11 pex25 with pRSA08 |
| pex11 pex25.Pex25-mCherry Pex3-GFP | pex11 pex25 with pRSA08 and pHOR46 |
| pex11 pex25.Pex25-mCherry.BiPN30-GFP-HDEL | pex11 pex25 with pRSA08 and pHIPX4-BiPN30-GFP-HDEL |
| pex11 pex25.Pex25-mCherry.GFP-SKL | pex11 pex25 with pRSA08 and pHIPX4-GFP-SKL |
| pex11 pex11C | PEX11 PEX11C double deletion strain |
| pex11 pex11C.DsRed-SKL | pex11 pex11C with pHIPZ4-DsRed-T1-SKL |
| pex25 pex11C | PEX25 PEX11C double deletion strain |
| pex25 pex11C.DsRed-SKL | pex25 pex11C with pHIPZ4-T1-DsRed-SKL |
| pex11.Pex11-mCherry | pex11 with pRSA03 |
| pex3 pex11 | PEX3 PEX11 double deletion strain |
| pex3 pex11.Pex3-GFP | pex3 pex11 with pHIPZ5-Pex3-GFP |
| pex3 pex11.Pex11-mCherry | pex3 pex11 with pRSA03 |
| pex3 pex11.Pex11-mCherry.BiPN30-GFP-HDEL | pex3 pex11.Pex11-mCherry with pRSA017 |
| pex3.Pex25-mCherry.BiPN30-GFP-HDEL | pex3 deletion strain with pRSA06 and pRSA017 |
| pex3.Pex3-GFP | PEX3 deletion with pHIPZ5-Pex3-GFP (Nagotu et al., 2008b) |
| pex3 | PEX3 deletion strain, ura3 (Baerends et al., 1996) |
| pex3 pex25 | PEX3 PEX25 double deletion strain |
| pex3 pex25.Pex3-GFP | pex3 pex25 with pHIPZ5-Pex3-GFP |
| pex3 pex11C | PEX3 PEX11C double deletion strain |
| pex3 pex11C.Pex3-GFP | pex3 pex11C with pHIPZ5-Pex3-GFP |
| pex3 pex11 pex25 | PEX3 PEX11 PEX25 triple deletion strain |
| pex3. BiPN30Pex3-mCherry | PEX3 deletion with pEXP-BiPN30-PEX3-mCherry |
| pex3 pex11.BiPN30Pex3-mCherry | PEX3 PEX11 deletion with pEXP-BiPN30-PEX3-mCherry |
| pex3 pex25.BiPN30Pex3-mCherry | PEX3 PEX25 deletion with pEXP-BiPN30-PEX3-mCherry |
| pex3 pex11 pex25.BiPN30Pex3-mCherry | PEX3 PEX11 PEX25 deletion with pEXP-BiPN30-PEX3-mCherry |
| L-40 S. cerevisiae | MATa leu2 his3 trp1 ade2 GAL4 gal80 LYS2::(lexAop)4-HIS3 URA3::(lexAop)s-lacZ (Takara Bio Inc.) |
| WT.GFP-Rho1 | WT with pEXP-GFPRho1 |
| WT.GFP-Rho1 DsRed-SKL | WT with pEXP-GFPRho1 and pSNA03 |
| pex11 pex25 RHO1tsPex25-mCherry | PEX11 PEX25 double deletion with pHIPH-Rho1 and pRSA08 |
| pex3 N50.Pex3-GFP | PEX3 deletion with N50.Pex3-GFP (Faber et al., 2002a) |
| pex3 RHO1tsN50.Pex3-GFP | PEX3 deletion with N50.Pex3-GFP with RHO1ts |