Key resources table
| Reagents or resource . | ||
|---|---|---|
| Experimental models: Cell lines | Source | Identifier |
| CFBE teton ΔF508-CFTR-HRP | PMID: 29503157 | N/A |
| CFBE teton ΔF508-CFTR-3HA, YFP-H148Q/I152L/F46L | PMID: 29503157 | N/A |
| CFBE ΔF508-CFTR-3HA | PMID: 29503157 | N/A |
| CFBE teton HBH-ΔF508-CFTR | PMID: 29503157 | N/A |
| CFBE teton ∆F508-CFTR-3HA-Nluc(CT) | This paper | N/A |
| COS-7 | JCRB cell bank | Cat#JCRB9127 |
| BHK | PMID: 29503157 | N/A |
| BHK HBH-ΔF508-CFTR-3HA | PMID: 29503157 | N/A |
| 293MSR | Thermo Fisher Scientific | Cat#R79507 |
| 293MSR RNF5/185 DKO | This paper | N/A |
| 293MSR HBH-∆F508-CFTR-3HA | This paper | N/A |
| 293MSR RNF5/185 DKO HBH-∆F508-CFTR-3HA | This paper | N/A |
| 293MSR teton ∆F508-CFTR-3HA-Nluc(CT) | This paper | N/A |
| BEAS-2B | ECACC | Cat#95102433 |
| BEAS-2B teton ∆F508-CFTR-3HA-Nluc(CT) | This paper | N/A |
| Recombinant DNA | Source | Identifier |
| pNUT ∆F508-CFTR-3HA | PMID: 7691813 | N/A |
| pcDNA 6xmyc-HERC3 | This paper | N/A |
| pcDNA 6xmyc-HERC3 ∆HECT | This paper | N/A |
| pcDNA 6xmyc-HERC3 ∆RLD | This paper | N/A |
| pcDNA 6xmyc-HERC3-C1018A | This paper | N/A |
| pNUT ∆F508-CFTR-3HA-HiBiT(CT) | This paper | N/A |
| pBiT1.1-N [TK/LgBiT] | Promega | Cat#N198A |
| pBiT1.1-N [TK/CNXss-LgBiT-KDEL] | This paper | N/A |
| pcDNA6 ∆F508-CFTR-HiBiT (Ex) | This paper | N/A |
| pCS2+ FLAG-hPLIC-1(UBQLN1) | Addgene | Cat#8663 |
| pCS2+ FLAG-hPLIC-2(UBQLN2) | Addgene | Cat#8661 |
| pCS2+ FLAG-UBQLN2 ∆UBL | This paper | N/A |
| pCS2+ FLAG-UBQLN2 ∆M | This paper | N/A |
| pCS2+ FLAG-UBQLN2 ∆UBA | This paper | N/A |
| pDONR221 | Addgene | Cat#3388 |
| pLX304 | Addgene | Cat#25890 |
| pLX303 HBH-∆F508 CFTR-3HA | This paper | N/A |
| pLIX402 | Addgene | Cat#41394 |
| pLIX402 blast | This paper | N/A |
| pLIX402 Nluc(CT) | This paper | N/A |
| pLIX402 ∆F508-CFTR-3HA-Nluc(CT) | This paper | N/A |
| pNUT-HBH-∆F508-CFTR-3HA | PMID: 29503157 | N/A |
| pCMV-TCRα-HA | PMID: 10601236 | N/A |
| pBiT2.1 TCRα-HiBiT | This paper | N/A |
| pBiT2.1 Insig-1-HiBiT | This paper | N/A |
| pBiT2.1 ∆Y490-ABCB1-HiBiT | This paper | N/A |
| pNUT CFTR M1 (1–413 aa)-HiBiT | This paper | N/A |
| pNUT ∆F508-CFTR M1N1 (1–635 aa)-HiBiT | This paper | N/A |
| pNUT CFTR M2 (733–1218 aa)-3HA-HiBiT | This paper | N/A |
| pBiT2.1 ∆F508-CFTR N1 (389–678 aa)-HiBiT | This paper | N/A |
| pNUT N1303K-CFTR-3HA-HiBiT | This paper | N/A |
| pEF6 D18G-TTR | PMID: 17431395 | N/A |
| pEF6 D18G-TTR-FLAG | PMID: 17431395 | N/A |
| pBiT2.1 ∆Y490-ABCB1 ∆M1 (1–379aa)-HiBiT | This paper | N/A |
| pBiT2.1 ∆Y490-ABCB1 ∆M2 (681–1025aa)-HiBiT | This paper | N/A |
| pBiT2.1 ∆Y490-ABCB1 (∆1-379)-CFTR-MSD1 (1–413 aa)-HiBiT (∆Y490-ABCB1-MSD1CFTR) | This paper | N/A |
| pBiT2.1 ∆Y490-ABCB1 (∆681-1025)-CFTR-MSD2 (837–1156 aa)-HiBiT (∆Y490-ABCB1-MSD2CFTR) | This paper | N/A |
| pSpCas9(BB)-2A-Puro (PX459) V2.0 | Addgene | Cat#62988 |
| pSpCas9(BB)-2A-Puro-RNF5 gRNA #1 | This paper | N/A |
| pSpCas9(BB)-2A-Puro-RNF5 gRNA #2 | This paper | N/A |
| pSpCas9(BB)-2A-Puro-RNF185 gRNA #1 | This paper | N/A |
| pSpCas9(BB)-2A-Puro-RNF185 gRNA #2 | This paper | N/A |
| pEU-E01-nbls-∆F508-CFTR (Biotin-∆F508-CFTR) | This paper | N/A |
| pEU-E01-nbls-CFTR M1 (1-413) (Biotin-CFTR M1) | This paper | N/A |
| pEU-E01-nbls-CFTR M2 (733-1218) (Biotin-CFTR M2) | This paper | N/A |
| pEU-E01-nFLAG-DHFR (FLAG-DHFR) | PMID: 27249653 | N/A |
| pEU-E01-nFLAG-HERC3 (FLAG-HERC3) | This paper | N/A |
| pCold-His-SUMO-RNF185 ΔTM | This paper | N/A |
| Antibodies | Source | Identifier |
| HA (16B12) | BioLegend | Cat#901515 |
| Na+/K+-ATPase | Santa Cruz Biotechnology | Cat#sc-48345 |
| HERC3 (2C1) | Abnova | Cat#H00008916-M01A |
| Ub (P4D1) | Santa Cruz Biotechnology | Cat#sc-8017 |
| Myc | Wako | Cat#017-21871 |
| RNF185 antiserum | This paper | N/A |
| K48-Ub (Apu2) | Merck Millipore | Cat#05-1307 |
| K63-Ub (Apu3) | Merck Millipore | Cat#05-1308 |
| FLAG (1E6) | Wako | Cat#014-22383 |
| UBQLN2 (D7R2Z) | Cell Signaling Technology | Cat#85509 |
| CNX | MBL | Cat#PM060 |
| UBQLN1 (D3T7F) | Cell Signaling Technology | Cat#14526 |
| UBQLN4 | Bethyl Laboratories | Cat#A305-237A |
| Prealbumine (TTR, E-1) | Santa Cruz Biotechnology | Cat#sc-377517 |
| HERC3 (2C1) | Abnova | Cat#H00008916-M01A |
| HiBiT | Promega | Cat#N7200 |
| Peroxidase AffiniPure Goat Anti-Mouse IgG (H+L) | Jackson Immuno Research | Cat#115-035-166 |
| Peroxidase AffiniPure Donkey Anti- Rabbit IgG (H+L) | Jackson Immuno Research | Cat#711-035-152 |
| Chemicals, peptides, and recombinant proteins | Source | Identifier |
| Lipofectamine RNAiMAX Transfection reagent | Invitrogen | Cat#13778150 |
| Doxycycline Hydrochloride n-Hydrate (Dox) | FUJIFILM Wako | Cat#049-31121 |
| 8-cpt-cAMP | Santa Cruz Biotechnology | Cat#sc-201569A |
| Forskolin | FUJIFILM Wako | Cat#067-02191 |
| 3-isobutyl-1-methyl-xanthine (IBMX) | FUJIFILM Wako | Cat#095-03413 |
| Genistein | FUJIFILM Wako | Cat#073-05531 |
| Cycloheximide (CHX) | FUJIFILM Wako | Cat#037-20991 |
| MG-132 | Cayman | Cat#10012628 |
| N-Ethylmaleimide (NEM) | FUJIFILM Wako | Cat#054-02063 |
| Pepstatin A | Peptide institute | Cat#4397 |
| Leupeptin Hemisulfate monohydrate | FUJIFILM Wako | Cat#122-03751 |
| Benzylsulfonyl Fluoride (PMSF) | FUJIFILM Wako | Cat#164-12181 |
| Ponceau-S | Sigma-Aldrich | Cat#24-3875-5 |
| Ponceau-S | Beacle, Inc | Cat#BCL-PSS-01 |
| NeutrAvidin agarose | Thermo Fisher Scientific | Cat#29200 |
| VX-809 | Cayman | Cat#22196 |
| VX-661 | Selleck Chemicals | Cat#S7059 |
| VX-445 | Selleck Chemicals | Cat#S8851 |
| VX-770 | Chemscene LLC | Cat#CS-0497 |
| Nunc FluoroNunc/LumiNunc 96-Well Plates | Thermo Fisher Scientific | Cat#437796 |
| Avidin, NeutrAvidin Biotin-binding protein | Invitrogen | Cat#A2666 |
| Nunc MicroWell 96-Well, Nunclon Delta-Treated, Flat-Bottom Microplate | Thermo Fisher Scientific | Cat#136101 |
| Nano-Glo Endurazine Live Cell Substrate | Promega | Cat#N2571 |
| Albumin, from Bovine Serum, Fraction V pH7.0 (BSA) | FUJIFILM Wako | Cat#015-27053 |
| (+)-Biotin | FUJIFILM Wako | Cat#029-08713 |
| Urea | FUJIFILM Wako | Cat#217-00615 |
| DbeQ | Selleck | Cat#S7199 |
| CO2 independent medium | Thermo Fisher Scientific | Cat#18045088 |
| Polyethylenimine (PEI) Max | Polyscience, Inc | Cat#24765 |
| G418 | FUJIFILM Wako | Cat#074-05963 |
| Puromycin | Sigma-Aldrich | Cat#P9620-10ML |
| Blasticidin S, Hydrochloride | Funakoshi | Cat#KK-400 |
| SuperSignal West Pico PLUS Chemiluminescent Substrate | Thermo Fisher Scientific | Cat#34580 |
| ImmunoStar Zeta | FUJIFILM Wako | Cat#295-72404 |
| ImmunoStar LD | FUJIFILM Wako | Cat#292-69903 |
| Oligonucleotides | Source | Identifier |
| RNF5 gRNA#1: 5′-GCCCAACGATCGTGGGCAGG-3′ | This paper | N/A |
| RNF5 gRNA#2: 5′-GACTCTTACCTGTACCCCGG-3′ | This paper | N/A |
| RNF185 gRNA#1: 5′-TGTAGTGGTACGGTGCAAAC-3′ | This paper | N/A |
| RNF185 gRNA#2: 5′-AATGGCGCTGGCGAGAGCGG-3′ | This paper | N/A |
| AllStars Neg. Control siRNA (siNT) | Qiagen | Cat#1027281 |
| HS_HERC3_4 siRNA: 5′-CAGCCCGAGCTGATCGCTTTA-3′ | Qiagen | Cat#SI00107233 |
| HS_HERC3_5 siRNA: 5′-CAGCGATCGGATTCCCATCTA-3′ | Qiagen | Cat#SI03066959 |
| HS_HERC3_8 siRNA: 5′-TTGAGTCTCTATATTGTCCAA-3′ | Qiagen | Cat#SI05092101 |
| Hs_RNF5_11 siRNA: 5′-CAGCCAGAGAAGAATCAGTAT-3′ | Qiagen | Cat#SI05063114 |
| Hs_RNF5_6 siRNA: 5′-GGGCGCGACCTTCGAATGTAA-3′ | Qiagen | Cat#SI03221484 |
| Hs_RNF5_7 siRNA: 5′-AACGGCAAGAGTGTCCAGTAT-3′ | Qiagen | Cat#SI04204116 |
| Hs_RNF185_2 siRNA: 5′-CACCTTCTGGAAATCCGCAAA-3′ | Qiagen | Cat#SI03059385 |
| Hs_RNF185_3 siRNA: 5′-CTCCGAGGCAGTAATAACTGA-3′ | Qiagen | Cat#SI03089982 |
| Hs_RNF185_8 siRNA: 5′-TCCCATCAGCTTTCTCCCTAA-3′ | Qiagen | Cat#SI04959598 |
| Hs_RFFL_1 siRNA 5′-ATCGGTTTCTTCAGTGCCTTA-3′ | Qiagen | Cat#SI00148232 |
| Hs_RFFL_3 siRNA 5′-TCGCAACTTTGTCAACTACAA-3′ | Qiagen | Cat#SI00148246 |
| Hs_RFFL_5 siRNA 5′-CTCCATGACATCTCTACCGAA-3′ | Qiagen | Cat#SI03089653 |
| RNF5 genome PCR primer pair: 5′-CCAGCCGAATGAGTTGGGTTAACAC-3′ (FW) 5′-GGCGAGAAACAGGAAGAGGGAATCC-3′ (Rev) | This paper | N/A |
| RNF185 genome PCR primer pair: 5′-ACCTAGCAAGCTAGAGGCTG-3′ (FW) 5′-AGGGCTCCTGTAACCGTCAA-3′ (Rev) | This paper | N/A |
| M13F sequence primer: 5′-GTAAAACGACGGCCAGT-3′ | This paper | N/A |
| M13R pUC sequence primer: 5′-CAGGAAACAGCTATGAC-3′ | This paper | N/A |
| HERC3 qPCR primer pair: 5′-GATCTGCCGAGAAAGCTATGG-3′ (FW) 5′-TTTGCCACCACACACCTTTAG-3′ (Rev) | This paper | N/A |
| GAPDH qPCR primer pair: 5′-CATGAGAAGTATGACAACAGCCT-3′ (FW) 5′-AGTCCTTCCACGATACCAAAGT-3′ (Rev) | This paper | N/A |
| Software and algorithms | Source | Identifier |
| GraphPad Prism 8 | GraphPad Software, Inc | RRID:SCR_002798 |
| Evolution Capt | Vilber-Lourmat | N/A |
| ImageQuant | Cytiva | RRID:SCR_014246 |
| Reagents or resource . | ||
|---|---|---|
| Experimental models: Cell lines | Source | Identifier |
| CFBE teton ΔF508-CFTR-HRP | PMID: 29503157 | N/A |
| CFBE teton ΔF508-CFTR-3HA, YFP-H148Q/I152L/F46L | PMID: 29503157 | N/A |
| CFBE ΔF508-CFTR-3HA | PMID: 29503157 | N/A |
| CFBE teton HBH-ΔF508-CFTR | PMID: 29503157 | N/A |
| CFBE teton ∆F508-CFTR-3HA-Nluc(CT) | This paper | N/A |
| COS-7 | JCRB cell bank | Cat#JCRB9127 |
| BHK | PMID: 29503157 | N/A |
| BHK HBH-ΔF508-CFTR-3HA | PMID: 29503157 | N/A |
| 293MSR | Thermo Fisher Scientific | Cat#R79507 |
| 293MSR RNF5/185 DKO | This paper | N/A |
| 293MSR HBH-∆F508-CFTR-3HA | This paper | N/A |
| 293MSR RNF5/185 DKO HBH-∆F508-CFTR-3HA | This paper | N/A |
| 293MSR teton ∆F508-CFTR-3HA-Nluc(CT) | This paper | N/A |
| BEAS-2B | ECACC | Cat#95102433 |
| BEAS-2B teton ∆F508-CFTR-3HA-Nluc(CT) | This paper | N/A |
| Recombinant DNA | Source | Identifier |
| pNUT ∆F508-CFTR-3HA | PMID: 7691813 | N/A |
| pcDNA 6xmyc-HERC3 | This paper | N/A |
| pcDNA 6xmyc-HERC3 ∆HECT | This paper | N/A |
| pcDNA 6xmyc-HERC3 ∆RLD | This paper | N/A |
| pcDNA 6xmyc-HERC3-C1018A | This paper | N/A |
| pNUT ∆F508-CFTR-3HA-HiBiT(CT) | This paper | N/A |
| pBiT1.1-N [TK/LgBiT] | Promega | Cat#N198A |
| pBiT1.1-N [TK/CNXss-LgBiT-KDEL] | This paper | N/A |
| pcDNA6 ∆F508-CFTR-HiBiT (Ex) | This paper | N/A |
| pCS2+ FLAG-hPLIC-1(UBQLN1) | Addgene | Cat#8663 |
| pCS2+ FLAG-hPLIC-2(UBQLN2) | Addgene | Cat#8661 |
| pCS2+ FLAG-UBQLN2 ∆UBL | This paper | N/A |
| pCS2+ FLAG-UBQLN2 ∆M | This paper | N/A |
| pCS2+ FLAG-UBQLN2 ∆UBA | This paper | N/A |
| pDONR221 | Addgene | Cat#3388 |
| pLX304 | Addgene | Cat#25890 |
| pLX303 HBH-∆F508 CFTR-3HA | This paper | N/A |
| pLIX402 | Addgene | Cat#41394 |
| pLIX402 blast | This paper | N/A |
| pLIX402 Nluc(CT) | This paper | N/A |
| pLIX402 ∆F508-CFTR-3HA-Nluc(CT) | This paper | N/A |
| pNUT-HBH-∆F508-CFTR-3HA | PMID: 29503157 | N/A |
| pCMV-TCRα-HA | PMID: 10601236 | N/A |
| pBiT2.1 TCRα-HiBiT | This paper | N/A |
| pBiT2.1 Insig-1-HiBiT | This paper | N/A |
| pBiT2.1 ∆Y490-ABCB1-HiBiT | This paper | N/A |
| pNUT CFTR M1 (1–413 aa)-HiBiT | This paper | N/A |
| pNUT ∆F508-CFTR M1N1 (1–635 aa)-HiBiT | This paper | N/A |
| pNUT CFTR M2 (733–1218 aa)-3HA-HiBiT | This paper | N/A |
| pBiT2.1 ∆F508-CFTR N1 (389–678 aa)-HiBiT | This paper | N/A |
| pNUT N1303K-CFTR-3HA-HiBiT | This paper | N/A |
| pEF6 D18G-TTR | PMID: 17431395 | N/A |
| pEF6 D18G-TTR-FLAG | PMID: 17431395 | N/A |
| pBiT2.1 ∆Y490-ABCB1 ∆M1 (1–379aa)-HiBiT | This paper | N/A |
| pBiT2.1 ∆Y490-ABCB1 ∆M2 (681–1025aa)-HiBiT | This paper | N/A |
| pBiT2.1 ∆Y490-ABCB1 (∆1-379)-CFTR-MSD1 (1–413 aa)-HiBiT (∆Y490-ABCB1-MSD1CFTR) | This paper | N/A |
| pBiT2.1 ∆Y490-ABCB1 (∆681-1025)-CFTR-MSD2 (837–1156 aa)-HiBiT (∆Y490-ABCB1-MSD2CFTR) | This paper | N/A |
| pSpCas9(BB)-2A-Puro (PX459) V2.0 | Addgene | Cat#62988 |
| pSpCas9(BB)-2A-Puro-RNF5 gRNA #1 | This paper | N/A |
| pSpCas9(BB)-2A-Puro-RNF5 gRNA #2 | This paper | N/A |
| pSpCas9(BB)-2A-Puro-RNF185 gRNA #1 | This paper | N/A |
| pSpCas9(BB)-2A-Puro-RNF185 gRNA #2 | This paper | N/A |
| pEU-E01-nbls-∆F508-CFTR (Biotin-∆F508-CFTR) | This paper | N/A |
| pEU-E01-nbls-CFTR M1 (1-413) (Biotin-CFTR M1) | This paper | N/A |
| pEU-E01-nbls-CFTR M2 (733-1218) (Biotin-CFTR M2) | This paper | N/A |
| pEU-E01-nFLAG-DHFR (FLAG-DHFR) | PMID: 27249653 | N/A |
| pEU-E01-nFLAG-HERC3 (FLAG-HERC3) | This paper | N/A |
| pCold-His-SUMO-RNF185 ΔTM | This paper | N/A |
| Antibodies | Source | Identifier |
| HA (16B12) | BioLegend | Cat#901515 |
| Na+/K+-ATPase | Santa Cruz Biotechnology | Cat#sc-48345 |
| HERC3 (2C1) | Abnova | Cat#H00008916-M01A |
| Ub (P4D1) | Santa Cruz Biotechnology | Cat#sc-8017 |
| Myc | Wako | Cat#017-21871 |
| RNF185 antiserum | This paper | N/A |
| K48-Ub (Apu2) | Merck Millipore | Cat#05-1307 |
| K63-Ub (Apu3) | Merck Millipore | Cat#05-1308 |
| FLAG (1E6) | Wako | Cat#014-22383 |
| UBQLN2 (D7R2Z) | Cell Signaling Technology | Cat#85509 |
| CNX | MBL | Cat#PM060 |
| UBQLN1 (D3T7F) | Cell Signaling Technology | Cat#14526 |
| UBQLN4 | Bethyl Laboratories | Cat#A305-237A |
| Prealbumine (TTR, E-1) | Santa Cruz Biotechnology | Cat#sc-377517 |
| HERC3 (2C1) | Abnova | Cat#H00008916-M01A |
| HiBiT | Promega | Cat#N7200 |
| Peroxidase AffiniPure Goat Anti-Mouse IgG (H+L) | Jackson Immuno Research | Cat#115-035-166 |
| Peroxidase AffiniPure Donkey Anti- Rabbit IgG (H+L) | Jackson Immuno Research | Cat#711-035-152 |
| Chemicals, peptides, and recombinant proteins | Source | Identifier |
| Lipofectamine RNAiMAX Transfection reagent | Invitrogen | Cat#13778150 |
| Doxycycline Hydrochloride n-Hydrate (Dox) | FUJIFILM Wako | Cat#049-31121 |
| 8-cpt-cAMP | Santa Cruz Biotechnology | Cat#sc-201569A |
| Forskolin | FUJIFILM Wako | Cat#067-02191 |
| 3-isobutyl-1-methyl-xanthine (IBMX) | FUJIFILM Wako | Cat#095-03413 |
| Genistein | FUJIFILM Wako | Cat#073-05531 |
| Cycloheximide (CHX) | FUJIFILM Wako | Cat#037-20991 |
| MG-132 | Cayman | Cat#10012628 |
| N-Ethylmaleimide (NEM) | FUJIFILM Wako | Cat#054-02063 |
| Pepstatin A | Peptide institute | Cat#4397 |
| Leupeptin Hemisulfate monohydrate | FUJIFILM Wako | Cat#122-03751 |
| Benzylsulfonyl Fluoride (PMSF) | FUJIFILM Wako | Cat#164-12181 |
| Ponceau-S | Sigma-Aldrich | Cat#24-3875-5 |
| Ponceau-S | Beacle, Inc | Cat#BCL-PSS-01 |
| NeutrAvidin agarose | Thermo Fisher Scientific | Cat#29200 |
| VX-809 | Cayman | Cat#22196 |
| VX-661 | Selleck Chemicals | Cat#S7059 |
| VX-445 | Selleck Chemicals | Cat#S8851 |
| VX-770 | Chemscene LLC | Cat#CS-0497 |
| Nunc FluoroNunc/LumiNunc 96-Well Plates | Thermo Fisher Scientific | Cat#437796 |
| Avidin, NeutrAvidin Biotin-binding protein | Invitrogen | Cat#A2666 |
| Nunc MicroWell 96-Well, Nunclon Delta-Treated, Flat-Bottom Microplate | Thermo Fisher Scientific | Cat#136101 |
| Nano-Glo Endurazine Live Cell Substrate | Promega | Cat#N2571 |
| Albumin, from Bovine Serum, Fraction V pH7.0 (BSA) | FUJIFILM Wako | Cat#015-27053 |
| (+)-Biotin | FUJIFILM Wako | Cat#029-08713 |
| Urea | FUJIFILM Wako | Cat#217-00615 |
| DbeQ | Selleck | Cat#S7199 |
| CO2 independent medium | Thermo Fisher Scientific | Cat#18045088 |
| Polyethylenimine (PEI) Max | Polyscience, Inc | Cat#24765 |
| G418 | FUJIFILM Wako | Cat#074-05963 |
| Puromycin | Sigma-Aldrich | Cat#P9620-10ML |
| Blasticidin S, Hydrochloride | Funakoshi | Cat#KK-400 |
| SuperSignal West Pico PLUS Chemiluminescent Substrate | Thermo Fisher Scientific | Cat#34580 |
| ImmunoStar Zeta | FUJIFILM Wako | Cat#295-72404 |
| ImmunoStar LD | FUJIFILM Wako | Cat#292-69903 |
| Oligonucleotides | Source | Identifier |
| RNF5 gRNA#1: 5′-GCCCAACGATCGTGGGCAGG-3′ | This paper | N/A |
| RNF5 gRNA#2: 5′-GACTCTTACCTGTACCCCGG-3′ | This paper | N/A |
| RNF185 gRNA#1: 5′-TGTAGTGGTACGGTGCAAAC-3′ | This paper | N/A |
| RNF185 gRNA#2: 5′-AATGGCGCTGGCGAGAGCGG-3′ | This paper | N/A |
| AllStars Neg. Control siRNA (siNT) | Qiagen | Cat#1027281 |
| HS_HERC3_4 siRNA: 5′-CAGCCCGAGCTGATCGCTTTA-3′ | Qiagen | Cat#SI00107233 |
| HS_HERC3_5 siRNA: 5′-CAGCGATCGGATTCCCATCTA-3′ | Qiagen | Cat#SI03066959 |
| HS_HERC3_8 siRNA: 5′-TTGAGTCTCTATATTGTCCAA-3′ | Qiagen | Cat#SI05092101 |
| Hs_RNF5_11 siRNA: 5′-CAGCCAGAGAAGAATCAGTAT-3′ | Qiagen | Cat#SI05063114 |
| Hs_RNF5_6 siRNA: 5′-GGGCGCGACCTTCGAATGTAA-3′ | Qiagen | Cat#SI03221484 |
| Hs_RNF5_7 siRNA: 5′-AACGGCAAGAGTGTCCAGTAT-3′ | Qiagen | Cat#SI04204116 |
| Hs_RNF185_2 siRNA: 5′-CACCTTCTGGAAATCCGCAAA-3′ | Qiagen | Cat#SI03059385 |
| Hs_RNF185_3 siRNA: 5′-CTCCGAGGCAGTAATAACTGA-3′ | Qiagen | Cat#SI03089982 |
| Hs_RNF185_8 siRNA: 5′-TCCCATCAGCTTTCTCCCTAA-3′ | Qiagen | Cat#SI04959598 |
| Hs_RFFL_1 siRNA 5′-ATCGGTTTCTTCAGTGCCTTA-3′ | Qiagen | Cat#SI00148232 |
| Hs_RFFL_3 siRNA 5′-TCGCAACTTTGTCAACTACAA-3′ | Qiagen | Cat#SI00148246 |
| Hs_RFFL_5 siRNA 5′-CTCCATGACATCTCTACCGAA-3′ | Qiagen | Cat#SI03089653 |
| RNF5 genome PCR primer pair: 5′-CCAGCCGAATGAGTTGGGTTAACAC-3′ (FW) 5′-GGCGAGAAACAGGAAGAGGGAATCC-3′ (Rev) | This paper | N/A |
| RNF185 genome PCR primer pair: 5′-ACCTAGCAAGCTAGAGGCTG-3′ (FW) 5′-AGGGCTCCTGTAACCGTCAA-3′ (Rev) | This paper | N/A |
| M13F sequence primer: 5′-GTAAAACGACGGCCAGT-3′ | This paper | N/A |
| M13R pUC sequence primer: 5′-CAGGAAACAGCTATGAC-3′ | This paper | N/A |
| HERC3 qPCR primer pair: 5′-GATCTGCCGAGAAAGCTATGG-3′ (FW) 5′-TTTGCCACCACACACCTTTAG-3′ (Rev) | This paper | N/A |
| GAPDH qPCR primer pair: 5′-CATGAGAAGTATGACAACAGCCT-3′ (FW) 5′-AGTCCTTCCACGATACCAAAGT-3′ (Rev) | This paper | N/A |
| Software and algorithms | Source | Identifier |
| GraphPad Prism 8 | GraphPad Software, Inc | RRID:SCR_002798 |
| Evolution Capt | Vilber-Lourmat | N/A |
| ImageQuant | Cytiva | RRID:SCR_014246 |