Table 2.
Mapped HPV-16 CD4+ T cell epitopes
AntigenEpitopeHLA restrictionNumber of patients
HPV-16-E1 VSFSELVRPFKSNKSTCCD DRB1*15:01 
FLRYQGVEFMSFLTALKRF Not defined 
AAMLAKFKELYGVSFSELV Not defined 
PSIADSIKTLLQQYC Not defined 
GWFYVEAVVEKKTGD Not defined 
CTFELSQMVQWAYDN Not defined 
AKFKELYGVSFSELVRPFK DRB1*07:01 
YDNDIVDDSEIAYKYAQLA Not defined 
QGIPKKNCILLYGAANTGK Not defined 
LFGMSLMKFLQGSVICFVN Not defined 
QGVEFMSFLTALKKRF DRB1*09:01 
LFGMSLMKFLQGSVICFVN Not defined 
WKSFFSRTWSRLSLH DRB1*04:01 
FMSFLTALKRFLQGIPKKN DRB1*11:04, DRB*04:01 
VEAVVEKKTGDAISDDENE ND 
HPV-16-E2 SVDSAPILTAFNSSHa DQA1*05:01–DQB1*03:01 
LRYRFKKHCTLYYTAVa DRB1*15:01 
HIDYWKHMRLECALYa DRB1*13:02 
NVCQDKILTHYENDSTDLRa Not defined 
QVVPTLAVSKNKALQAIELa Not defined 
VSLEVYLTAPTGCIKKHGYa Not defined 
HPV-16-E6 KQRFHNIRGRWTGRCMSCCa DRB1*15:01/DQB1*03:01 
EKQRHLDKKQRFHNIRGRWa DRB1*13:02/DQR1*13:03 
VYDFAFRDLCIVYRDa Not defined 
AFRDLCIVYRDGNPYAVCDa Not defined 
VCDKCLKFYSKISEYRHYCa Not defined 
HPV-16-E7 VQSTHVDIRTLEDLLMGTLa DQA1*05:01–DQB1*03:01 
YEQLNDSSEEEDEIDa DQB1*06:09 
TPTLHEYMLDLQPETTDLYa Not defined 
AntigenEpitopeHLA restrictionNumber of patients
HPV-16-E1 VSFSELVRPFKSNKSTCCD DRB1*15:01 
FLRYQGVEFMSFLTALKRF Not defined 
AAMLAKFKELYGVSFSELV Not defined 
PSIADSIKTLLQQYC Not defined 
GWFYVEAVVEKKTGD Not defined 
CTFELSQMVQWAYDN Not defined 
AKFKELYGVSFSELVRPFK DRB1*07:01 
YDNDIVDDSEIAYKYAQLA Not defined 
QGIPKKNCILLYGAANTGK Not defined 
LFGMSLMKFLQGSVICFVN Not defined 
QGVEFMSFLTALKKRF DRB1*09:01 
LFGMSLMKFLQGSVICFVN Not defined 
WKSFFSRTWSRLSLH DRB1*04:01 
FMSFLTALKRFLQGIPKKN DRB1*11:04, DRB*04:01 
VEAVVEKKTGDAISDDENE ND 
HPV-16-E2 SVDSAPILTAFNSSHa DQA1*05:01–DQB1*03:01 
LRYRFKKHCTLYYTAVa DRB1*15:01 
HIDYWKHMRLECALYa DRB1*13:02 
NVCQDKILTHYENDSTDLRa Not defined 
QVVPTLAVSKNKALQAIELa Not defined 
VSLEVYLTAPTGCIKKHGYa Not defined 
HPV-16-E6 KQRFHNIRGRWTGRCMSCCa DRB1*15:01/DQB1*03:01 
EKQRHLDKKQRFHNIRGRWa DRB1*13:02/DQR1*13:03 
VYDFAFRDLCIVYRDa Not defined 
AFRDLCIVYRDGNPYAVCDa Not defined 
VCDKCLKFYSKISEYRHYCa Not defined 
HPV-16-E7 VQSTHVDIRTLEDLLMGTLa DQA1*05:01–DQB1*03:01 
YEQLNDSSEEEDEIDa DQB1*06:09 
TPTLHEYMLDLQPETTDLYa Not defined 
a

Previously published epitope sequences.

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