Primers used in ChIP, RES, RT-PCR, and DC-PCR analyses
| Primer | Forward (5′ to 3′) | Reverse (5′ to 3′) |
| ChIP assays | ||
| Eμ | GGGAGTGAGGCTCTCTCATA | ACCACAGCTACAAGTTTACCTA |
| Iμ | CTTCCCTCTGATTATTGGTCTCCA | CTCAACCACCAACCAGCATG |
| Sμ-U | TCTAAAATGCGCTAAACTGAGG | AGCGTAGCATAGCTGAGCTC |
| Sμ-D | CTGAATGAGTTTCACCAGGCC | GGCCTGTCCTGCTTGGCTTC |
| Sμ-D.1 | GGGGTGAGCCGGGATGTTTT | AGCCAGCTCTACTCACTCTT |
| Sμ-D.2 | GCTGACATGGATTATGTGAGG | CCTACACCAGATCATCCAGTACAGCT |
| Cμ-U | CTTCCCAAATGTCTTCCCCC | TGCGAGGTGGCTAGGTACTTG |
| Cμ-D | TAACACTGCCTCTTTGGGCTC | TGCTTGTCCTACCCCTGCC |
| Iγ1-UP | TGTTGGGCACCATTTTGTTG | AGCACATGGCCTGGAGAAAC |
| Iγ1-P | GAGTCTCAAGGGTACCGCCTCA | CAGAGTCACAGCCTTTGTCCCA |
| Iγ1 | TATGATGGAAAGAGGTAGCATT | CTGGGCTGGTCTGTCAACTCCTT |
| Sγ1-U | GGGGGAGGAGATATCCAAGA | CAGCTCTTTTGCAGGTCTTG |
| Sγ1-D | CAGGCAAACTAAACCAGTGGG | AGGATGTCCACCCTCACCCAGGC |
| Cγ1-U | GCCCAAACTAACTCCATGGTG | CAACGTTGCAGGTGACGGT |
| Cγ1-D | CAACACCCTGCCAATAAGGC | CCCACTTGTAAATGCCGAGG |
| Sγ3-D.1 | CAGGCTGGGAAACTCTTGGG | AGGTTAGTCCCCATACTTGAACC |
| RES assays | ||
| L.1 | GGTGACTGCAGAGATCTGAATTCAA | |
| L.2 | AGCTTTGAATTCAGATCTCTGC | |
| Sμ-U.A (round 1) | L.1 | AGCGTAGCATAGCTGAGCTC |
| Sμ-U.A (round 2) | CTGAATTCAAAGCTTGCTGAGCA | CAGCCTAGTTTAGCTTAGCG |
| Sμ-D.A (round 1) | L.1 | AAGAGTGAGTAGAGCTGGCT |
| Sμ-D.A (round 2) | CTGCAGAGATCTGAATTCAAAGC | AAGAGTGAGTAGAGCTGGCT |
| Cμ.A (round 1) | L.1 | GATCCCTGTGAGTCACAGTA |
| Cμ.A (round 2) | CTGAATTCAAAGCTTTTTTCCAAC | CACTAGCCACACCCTTAGCA |
| Sγ3-D.A (round 1) | L.1 | ATGAGGACTAGGTTGGGCAG |
| Sγ3-D.A (round 2) | CTGAATTCAAAGCTTCTACAAACCT | GGGAGCTGGGGCTATCAGA |
| Cγ3-D.A (round 1) | L.1 | CAGAATGCTGGGTGAGTGGT |
| Cγ3-D.A (round 2) | CTGAATTCAAAGCTTAGCTTTGCC | TGTGAGTTTTGTACAAGGAG |
| c-Myc.A (round 1) | L.1 | GAAACTCTGGTGCATAAACTGACCTAAC |
| c-Myc.A (round 2) | GAGATCTGAATTCAAAGCTTACAGTCCC | TCGAGGAGGAGCTGGAATCTCTCGTGA |
| RT-PCR | ||
| IFN-γ | GGATGCATTCATGAGTATTGC | CCTTTTCCGCTTCCTGAGG |
| DC-PCR | ||
| μ→γ1 (round 1) | CAGCCTAGTTTAGCTTAGCG | CTCGCAAAAGCAGCATATAC |
| μ→γ1 (round 2) | GCTCAGCTGTGCTTTTTAGAGCCTCG | CATAGGCAGAACAGCCACAGCTAGAG |
| μ→γ3 (round 1) | AGCGTAGCATAGCTGAGCTC | GGGAGCTGGGGCTATCAGA |
| μ→γ3 (round 2) | GCTCAGCTGTGCTTTTTAGAGCCTCG | ACAGGGTCCCAGGTTATGCAG |
| Gapd (round 1) | TCAACTACATGGTCTACATGTTCC | AATGGAGCCTGGCAGACTGA |
| Primer | Forward (5′ to 3′) | Reverse (5′ to 3′) |
| ChIP assays | ||
| Eμ | GGGAGTGAGGCTCTCTCATA | ACCACAGCTACAAGTTTACCTA |
| Iμ | CTTCCCTCTGATTATTGGTCTCCA | CTCAACCACCAACCAGCATG |
| Sμ-U | TCTAAAATGCGCTAAACTGAGG | AGCGTAGCATAGCTGAGCTC |
| Sμ-D | CTGAATGAGTTTCACCAGGCC | GGCCTGTCCTGCTTGGCTTC |
| Sμ-D.1 | GGGGTGAGCCGGGATGTTTT | AGCCAGCTCTACTCACTCTT |
| Sμ-D.2 | GCTGACATGGATTATGTGAGG | CCTACACCAGATCATCCAGTACAGCT |
| Cμ-U | CTTCCCAAATGTCTTCCCCC | TGCGAGGTGGCTAGGTACTTG |
| Cμ-D | TAACACTGCCTCTTTGGGCTC | TGCTTGTCCTACCCCTGCC |
| Iγ1-UP | TGTTGGGCACCATTTTGTTG | AGCACATGGCCTGGAGAAAC |
| Iγ1-P | GAGTCTCAAGGGTACCGCCTCA | CAGAGTCACAGCCTTTGTCCCA |
| Iγ1 | TATGATGGAAAGAGGTAGCATT | CTGGGCTGGTCTGTCAACTCCTT |
| Sγ1-U | GGGGGAGGAGATATCCAAGA | CAGCTCTTTTGCAGGTCTTG |
| Sγ1-D | CAGGCAAACTAAACCAGTGGG | AGGATGTCCACCCTCACCCAGGC |
| Cγ1-U | GCCCAAACTAACTCCATGGTG | CAACGTTGCAGGTGACGGT |
| Cγ1-D | CAACACCCTGCCAATAAGGC | CCCACTTGTAAATGCCGAGG |
| Sγ3-D.1 | CAGGCTGGGAAACTCTTGGG | AGGTTAGTCCCCATACTTGAACC |
| RES assays | ||
| L.1 | GGTGACTGCAGAGATCTGAATTCAA | |
| L.2 | AGCTTTGAATTCAGATCTCTGC | |
| Sμ-U.A (round 1) | L.1 | AGCGTAGCATAGCTGAGCTC |
| Sμ-U.A (round 2) | CTGAATTCAAAGCTTGCTGAGCA | CAGCCTAGTTTAGCTTAGCG |
| Sμ-D.A (round 1) | L.1 | AAGAGTGAGTAGAGCTGGCT |
| Sμ-D.A (round 2) | CTGCAGAGATCTGAATTCAAAGC | AAGAGTGAGTAGAGCTGGCT |
| Cμ.A (round 1) | L.1 | GATCCCTGTGAGTCACAGTA |
| Cμ.A (round 2) | CTGAATTCAAAGCTTTTTTCCAAC | CACTAGCCACACCCTTAGCA |
| Sγ3-D.A (round 1) | L.1 | ATGAGGACTAGGTTGGGCAG |
| Sγ3-D.A (round 2) | CTGAATTCAAAGCTTCTACAAACCT | GGGAGCTGGGGCTATCAGA |
| Cγ3-D.A (round 1) | L.1 | CAGAATGCTGGGTGAGTGGT |
| Cγ3-D.A (round 2) | CTGAATTCAAAGCTTAGCTTTGCC | TGTGAGTTTTGTACAAGGAG |
| c-Myc.A (round 1) | L.1 | GAAACTCTGGTGCATAAACTGACCTAAC |
| c-Myc.A (round 2) | GAGATCTGAATTCAAAGCTTACAGTCCC | TCGAGGAGGAGCTGGAATCTCTCGTGA |
| RT-PCR | ||
| IFN-γ | GGATGCATTCATGAGTATTGC | CCTTTTCCGCTTCCTGAGG |
| DC-PCR | ||
| μ→γ1 (round 1) | CAGCCTAGTTTAGCTTAGCG | CTCGCAAAAGCAGCATATAC |
| μ→γ1 (round 2) | GCTCAGCTGTGCTTTTTAGAGCCTCG | CATAGGCAGAACAGCCACAGCTAGAG |
| μ→γ3 (round 1) | AGCGTAGCATAGCTGAGCTC | GGGAGCTGGGGCTATCAGA |
| μ→γ3 (round 2) | GCTCAGCTGTGCTTTTTAGAGCCTCG | ACAGGGTCCCAGGTTATGCAG |
| Gapd (round 1) | TCAACTACATGGTCTACATGTTCC | AATGGAGCCTGGCAGACTGA |