Table I. Summary of endogenous TCR Vβ... | Rockefeller University Press

Table I.

Summary of endogenous TCR Vβ and TCR Jβ segment usage and CDR3 sequences

Mouse	Percent positive for Vβ by flow cytometry	CDR3-IMGT	TRBV gene	TRBJ gene	Number of identical clones	GenBank accession no.
i	80% Vβ4	A S S Q S R Y E Q Y	2*01	2-7*01	18/19^a	EU647570
	9% Vβ10b	A S S S S G F T E V F	4*01	1-1*01 or 02	14/15^b	EU647566
ii	51% Vβ13	A S S F T Q T N T E V F	14*01	1-1*01	13/13	EU647568
	11% Vβ10b	A S S S T G Y Y A E Q F	4*01	2-1*01	18/18	EU647569
iii	91% Vβ8.3	A S R D G S Y N S P L Y	13-1*01 or 02	1-6*01	32/32	EU647565
iv	34% Vβ3	A S S L S T G Y Y A E Q F	26*01 or 02	2-1*01	20/20	EU647574
v	65% Vβ8.3	A S S E P T G G V Y E Q Y	13-1*01 or 02	2-7*01	17/17	EU647575
	9.5% Vβ10b	A S S S G G G Y A E Q F	4*01	2-1*01	11/11	EU647577
vi	100% Vβ8.1/8.2	A S G D A W A G S Y E Q Y	13-2*01 or 03, or 04	2-7*01	19/20^c	EU647573
vii	70% Vβ12	A S S L A D R G Q D T Q Y	15*01	2-5*01	19/19	EU647576

Mouse	Percent positive for Vβ by flow cytometry	CDR3-IMGT	TRBV gene	TRBJ gene	Number of identical clones	GenBank accession no.
i	80% Vβ4	A S S Q S R Y E Q Y	2*01	2-7*01	18/19^a	EU647570
	9% Vβ10b	A S S S S G F T E V F	4*01	1-1*01 or 02	14/15^b	EU647566
ii	51% Vβ13	A S S F T Q T N T E V F	14*01	1-1*01	13/13	EU647568
	11% Vβ10b	A S S S T G Y Y A E Q F	4*01	2-1*01	18/18	EU647569
iii	91% Vβ8.3	A S R D G S Y N S P L Y	13-1*01 or 02	1-6*01	32/32	EU647565
iv	34% Vβ3	A S S L S T G Y Y A E Q F	26*01 or 02	2-1*01	20/20	EU647574
v	65% Vβ8.3	A S S E P T G G V Y E Q Y	13-1*01 or 02	2-7*01	17/17	EU647575
	9.5% Vβ10b	A S S S G G G Y A E Q F	4*01	2-1*01	11/11	EU647577
vi	100% Vβ8.1/8.2	A S G D A W A G S Y E Q Y	13-2*01 or 03, or 04	2-7*01	19/20^c	EU647573
vii	70% Vβ12	A S S L A D R G Q D T Q Y	15*01	2-5*01	19/19	EU647576

For 1/19 clones CDR3-IMGT is A S N Q S R Y E Q Y (accession no. EU647571).

For 1/15 clones CDR3-IMGT is A S I R G T E V F (accession no. EU647567).

For 1/20 clones CDR3-IMGT is A S G D P W A G S Y E Q Y (accession no. EU647572).