Genetic interactions with rtn1Δ yop1Δ
| Genotype | Genetic interaction | Growth on 5-FOA | Growth on YPD | ||||
| 16°C | 23°C | 30°C | 34°C | 37°C | |||
| rtn1Δ yop1Δ | NA | + | + | + | + | + | |
| Nup84 subcomplex | |||||||
| nup85Δ | NA | + | + | + | + | − | − |
| nup85Δ rtn1Δ yop1Δ | synthetic lethal | − | − | − | − | − | − |
| nup120Δ | NA | + | + | + | + | + | − |
| nup120Δ rtn1Δ yop1Δ | synthetic sick | −+ | −+ | −+ | −+ | −+ | − |
| nup145Δ + pNUP145-R4Δ1-1090 | NA | + | + | + | + | + | − |
| nup145Δ rtn1Δ yop1Δ + pNUP145-R4 | enhanced lethality | + | + | + | −+ | −−+ | − |
| nup145Δ + pNUP145-33 | NA | + | + | + | + | + | − |
| nup145Δ rtn1Δ yop1Δ + pNUP145-33 | synthetic lethal | − | − | − | − | − | − |
| Poms | |||||||
| pom34Δ rtn1Δ yop1Δ | none | + | + | + | + | + | + |
| pom152Δ rtn1Δ yop1Δ | enhanced lethality | + | −+ | + | + | + | −+ |
| pom34Δ pom152Δ rtn1Δ yop1Δ | synthetic lethal | − | − | − | − | − | − |
| Linker Nups | |||||||
| nup82-3 | NA | + | + | + | + | + | − |
| nup82-3 rtn1Δ yop1Δ | synthetic lethal | − | − | − | − | − | − |
| nup116Δ | NA | + | + | + | + | + | − |
| nup116Δ rtn1Δ yop1Δ | synthetic sick | −−+ | −−+ | −−+ | −−+ | −−+ | − |
| gle2Δ | NA | + | + | + | + | + | − |
| gle2Δ rtn1Δ yop1Δ | synthetic lethal | − | − | − | − | − | − |
| Core Nups | |||||||
| nup188Δ | NA | + | + | + | + | + | + |
| nup188Δ rtn1Δ yop1Δ | synthetic lethal | − | − | − | − | − | − |
| INM proteins | |||||||
| spo7Δ | NA | + | + | + | + | + | −+ |
| spo7Δ rtn1Δ yop1Δ | synthetic sick | −−+ | −+ | −+ | −+ | −+ | −−+ |
| nem1Δ | NA | + | + | + | + | + | −+ |
| nem1Δ rtn1Δ yop1Δ | synthetic sick | −−+ | −−+ | −−+ | −−+ | −−+ | −−+ |
| Genotype | Genetic interaction | Growth on 5-FOA | Growth on YPD | ||||
| 16°C | 23°C | 30°C | 34°C | 37°C | |||
| rtn1Δ yop1Δ | NA | + | + | + | + | + | |
| Nup84 subcomplex | |||||||
| nup85Δ | NA | + | + | + | + | − | − |
| nup85Δ rtn1Δ yop1Δ | synthetic lethal | − | − | − | − | − | − |
| nup120Δ | NA | + | + | + | + | + | − |
| nup120Δ rtn1Δ yop1Δ | synthetic sick | −+ | −+ | −+ | −+ | −+ | − |
| nup145Δ + pNUP145-R4Δ1-1090 | NA | + | + | + | + | + | − |
| nup145Δ rtn1Δ yop1Δ + pNUP145-R4 | enhanced lethality | + | + | + | −+ | −−+ | − |
| nup145Δ + pNUP145-33 | NA | + | + | + | + | + | − |
| nup145Δ rtn1Δ yop1Δ + pNUP145-33 | synthetic lethal | − | − | − | − | − | − |
| Poms | |||||||
| pom34Δ rtn1Δ yop1Δ | none | + | + | + | + | + | + |
| pom152Δ rtn1Δ yop1Δ | enhanced lethality | + | −+ | + | + | + | −+ |
| pom34Δ pom152Δ rtn1Δ yop1Δ | synthetic lethal | − | − | − | − | − | − |
| Linker Nups | |||||||
| nup82-3 | NA | + | + | + | + | + | − |
| nup82-3 rtn1Δ yop1Δ | synthetic lethal | − | − | − | − | − | − |
| nup116Δ | NA | + | + | + | + | + | − |
| nup116Δ rtn1Δ yop1Δ | synthetic sick | −−+ | −−+ | −−+ | −−+ | −−+ | − |
| gle2Δ | NA | + | + | + | + | + | − |
| gle2Δ rtn1Δ yop1Δ | synthetic lethal | − | − | − | − | − | − |
| Core Nups | |||||||
| nup188Δ | NA | + | + | + | + | + | + |
| nup188Δ rtn1Δ yop1Δ | synthetic lethal | − | − | − | − | − | − |
| INM proteins | |||||||
| spo7Δ | NA | + | + | + | + | + | −+ |
| spo7Δ rtn1Δ yop1Δ | synthetic sick | −−+ | −+ | −+ | −+ | −+ | −−+ |
| nem1Δ | NA | + | + | + | + | + | −+ |
| nem1Δ rtn1Δ yop1Δ | synthetic sick | −−+ | −−+ | −−+ | −−+ | −−+ | −−+ |
rtn1Δ yop1Δ triple mutants showing no enhanced growth defects included nup84Δ, nup133Δ, nup145ΔN, snl1Δ, nup53Δ, nup170Δ, nup59Δ, brr6Δ/brr6-1, apq12Δ, nup57-E17, nup159-1/rat7-1, nic96-1, nup1Δ, nup2Δ, nup60Δ, nup42Δ, and nup100Δ. Synthetic lethal and synthetic sick strains were maintained with a URA3/CEN plasmid carrying wild-type copies of NUP85, NUP120, NUP145, POM34, NUP116, GLE2, or NUP188 or a wild-type copy of RTN1 for spo7Δ, nem1Δ, and nup82-3 triple mutants. Synthetic lethality indicates failure to grow on 5-FOA; synthetic sickness indicates moderate to severe growth inhibition on 5-FOA. Enhanced lethality indicates increased temperature sensitivity of 5-FOA–resistant ura− isolates grown on YPD (1% yeast extract, 2% peptone, and 2% dextrose) at the given temperatures. +, growth; −+, moderate growth inhibition; −−+, severe growth inhibition; −, no growth at the indicated temperature.