Table II.

S. cerevisiae strains used in this study

Strain  Genotype  Reference or source  
YEF473A  a his3 leu2 lys2 trp1 ura3  (Bi and Pringle, 1996)  
YEF1820  a/α his3/his3 leu2/leu2 lys2/lys2 trp1/trp1 ura3/ura3 myo1Δ::KanMX6/myo1Δ::HIS3  (Bi et al., 1998)  
YEF1804  As YEF473A except myo1Δ::KanMX6  (Bi et al., 1998)  
YEF5762  As YEF473A except CHS2-GFP:His3MX6  This studya  
YEF5804  As YEF473A except CDC3-mCherry:LEU2  This studyb  
YEF5874  As YEF473A except CHS2-GFP:His3MX6 CDC3-mCherry:LEU2  This studyc  
YEF5986  As YEF473A except MYO2-GFP:His3 CDC3-mCherry:LEU2  This studyc  
YEF6179  a mlc1-11 MYO1-GFP:KanMX6 CDC3-mCherry:LEU2  This studyd  
YEF6113  a MYO1-GFP:His3MX6 NUP57-GFP:URA3 his3 leu2 lys2 ura3  This studye  
YEF6307  a MYO1-GFP NUP57-GFP:URA3  This studyf  
YEF6308  a myo1-TD2Δ-GFP NUP57-GFP:URA3  This studyf  
YEF6309  a myo1-Tail-GFP NUP57-GFP:URA3  This studyf  
YEF6310  a myo1-TD2-GFP NUP57-GFP:URA3  This studyf  
YEF6316  a bni5Δ::His3MX6 MYO1-GFP NUP57-GFP:URA3  This studyf  
YEF6321  a MYO1-GFP BNI5-mCherry:KanMX6  This studyg  
YEF6322  a bni5Δ::His3MX6 myo1-TD2Δ-GFP  This studyh  
YEF6323  a bni5Δ::His3MX6 myo1-TD2Δ-GFP CDC3-mCherry:LEU2  This studyh  
YEF6325  a iqg1Δ::His3MX6 CDC3-mCherry:LEU2 [pRS316-MYO1-C-GFP]  This studyi  
YEF6326  a myo1-mTD1-GFP BNI5-mCherry:KanMX6  This studyj  
Y5005-8D  As YEF473A except mlc1-11  (Luo et al., 2004)  
YKT520  As YEF473A except MYO2-GFP:HIS3  K. Tanaka  
YKT662  As YEF473A except MYO2-GFP:TRP1  K. Tanaka  
RNY970  As YEF473A except iqg1Δ::His3MX6 [YCp50-IQG1]  J.R. Pringle  
RNY2594  As YEF473A except iqg1Δ::His3MX6 MYO1-GFP:KanMX6 [pRS315-IQG1-GST]  This studyk  
RNY2595  As YEF473A except iqg1Δ::His3MX6 MYO1-GFP:KanMX6 [pRS315-IQG1(Δ2-411)-GST]  This studyk  
RNY2596  As YEF473A except iqg1Δ::His3MX6 MYO1-GFP:KanMX6 CDC3-mCherry:URA3 [pRS315-IQG1-GST]  This studyl  
RNY2597  As YEF473A except iqg1Δ::His3MX6 MYO1-GFP:KanMX6 CDC3-mCherry:URA3 [pRS315-IQG1(Δ2-411)-GST]  This studyl  
Masa1243  As YEF473A except myo1Δ::URA3-KanMX6 [pUG23-MYO1]  See text  
YJL221A  As YEF473A except myo1-TD1-GFP  See text  
YJL222A  As YEF473A except myo1-TD2-GFP  See text  
YJL335A  As YEF473A except myo1-Tail-GFP  See text  
YJL376A  As YEF473A except myo1-AD-GFP  See text  
YJL488A  As YEF473A except myo1-TD2Δ-GFP  See text  
YJL489A  As YEF473A except myo1-mTD1-GFP  See text  
XDY7  YEF1820 [pRS316-MYO1-C-TAP]  This study  
XDY41  As YEF473A except MYO1-GFP  See text  
XDY99  YEF1820 [pRS316-MYO1-TD2Δ-C-TAP]  This study  
XDY154  YEF473A [pRS316-MYO1-TD2-GFP]  This studym  
XDY173  a mlc1-11 [pRS316-MYO1-TD2-GFP]  This studym  
XDY189  a myo1-mTD1-GFP BNI5-3HA:His3MX6  This studyn  
XDY190  a myo1-Tail-GFP BNI5-3HA:His3MX6  This studyn  
XDY191  a myo1-TD1-GFP BNI5-3HA:His3MX6  This studyn  
XDY192  a myo1-TD2-GFP BNI5-3HA:His3MX6  This studyn  
XDY194  a myo1-AD-GFP BNI5-3HA:His3MX6  This studyn  
XDY211  a myo1-mTD1-GFP BNI5-mCherry:KanMX6 [pRS316-N-NotI-MYO1]  This studyo  
XDY218  a iqg1Δ::His3MX6 [pRS316-MYO1-TD2-GFP]  This studyp  
XDY254  a MYO1-GFP bni5Δ::His3MX6  This studyn  
XDY257  a myo1-TD2-GFP bni5Δ::His3MX6  This studyn  
XDY258  a myo1-mTD1-GFP bni5Δ::His3MX6  This studyn  
XDY286  a MYO1-GFP CDC3-mCherry:LEU2  This studyq  
XDY287  a bni5Δ::His3MX6 MYO1-GFP CDC3-mCherry:LEU2  This studyq  
XDY288  a myo1-Tail-GFP CDC3-mCherry:LEU2  This studyq  
XDY289  a myo1-TD2Δ-GFP CDC3-mCherry:LEU2  This studyq  
XDY290  a myo1-TD2-GFP CDC3-mCherry:LEU2  This studyq  
XDY295  a iqg1Δ::His3MX6 [pRS316-MYO1-TD2-GFP] [pRS315-IQG1-GST]  This studyp  
XDY296  a iqg1Δ::His3MX6 [pRS316-MYO1-TD2-GFP] [pRS315-IQG1(1-697)-GST]  This studyp  
XDY300  a iqg1Δ::His3MX6 [pRS316-MYO1-TD2-GFP] [pRS315-IQG1(Δ2-411)-GST]  This studyp  
Strain  Genotype  Reference or source  
YEF473A  a his3 leu2 lys2 trp1 ura3  (Bi and Pringle, 1996)  
YEF1820  a/α his3/his3 leu2/leu2 lys2/lys2 trp1/trp1 ura3/ura3 myo1Δ::KanMX6/myo1Δ::HIS3  (Bi et al., 1998)  
YEF1804  As YEF473A except myo1Δ::KanMX6  (Bi et al., 1998)  
YEF5762  As YEF473A except CHS2-GFP:His3MX6  This studya  
YEF5804  As YEF473A except CDC3-mCherry:LEU2  This studyb  
YEF5874  As YEF473A except CHS2-GFP:His3MX6 CDC3-mCherry:LEU2  This studyc  
YEF5986  As YEF473A except MYO2-GFP:His3 CDC3-mCherry:LEU2  This studyc  
YEF6179  a mlc1-11 MYO1-GFP:KanMX6 CDC3-mCherry:LEU2  This studyd  
YEF6113  a MYO1-GFP:His3MX6 NUP57-GFP:URA3 his3 leu2 lys2 ura3  This studye  
YEF6307  a MYO1-GFP NUP57-GFP:URA3  This studyf  
YEF6308  a myo1-TD2Δ-GFP NUP57-GFP:URA3  This studyf  
YEF6309  a myo1-Tail-GFP NUP57-GFP:URA3  This studyf  
YEF6310  a myo1-TD2-GFP NUP57-GFP:URA3  This studyf  
YEF6316  a bni5Δ::His3MX6 MYO1-GFP NUP57-GFP:URA3  This studyf  
YEF6321  a MYO1-GFP BNI5-mCherry:KanMX6  This studyg  
YEF6322  a bni5Δ::His3MX6 myo1-TD2Δ-GFP  This studyh  
YEF6323  a bni5Δ::His3MX6 myo1-TD2Δ-GFP CDC3-mCherry:LEU2  This studyh  
YEF6325  a iqg1Δ::His3MX6 CDC3-mCherry:LEU2 [pRS316-MYO1-C-GFP]  This studyi  
YEF6326  a myo1-mTD1-GFP BNI5-mCherry:KanMX6  This studyj  
Y5005-8D  As YEF473A except mlc1-11  (Luo et al., 2004)  
YKT520  As YEF473A except MYO2-GFP:HIS3  K. Tanaka  
YKT662  As YEF473A except MYO2-GFP:TRP1  K. Tanaka  
RNY970  As YEF473A except iqg1Δ::His3MX6 [YCp50-IQG1]  J.R. Pringle  
RNY2594  As YEF473A except iqg1Δ::His3MX6 MYO1-GFP:KanMX6 [pRS315-IQG1-GST]  This studyk  
RNY2595  As YEF473A except iqg1Δ::His3MX6 MYO1-GFP:KanMX6 [pRS315-IQG1(Δ2-411)-GST]  This studyk  
RNY2596  As YEF473A except iqg1Δ::His3MX6 MYO1-GFP:KanMX6 CDC3-mCherry:URA3 [pRS315-IQG1-GST]  This studyl  
RNY2597  As YEF473A except iqg1Δ::His3MX6 MYO1-GFP:KanMX6 CDC3-mCherry:URA3 [pRS315-IQG1(Δ2-411)-GST]  This studyl  
Masa1243  As YEF473A except myo1Δ::URA3-KanMX6 [pUG23-MYO1]  See text  
YJL221A  As YEF473A except myo1-TD1-GFP  See text  
YJL222A  As YEF473A except myo1-TD2-GFP  See text  
YJL335A  As YEF473A except myo1-Tail-GFP  See text  
YJL376A  As YEF473A except myo1-AD-GFP  See text  
YJL488A  As YEF473A except myo1-TD2Δ-GFP  See text  
YJL489A  As YEF473A except myo1-mTD1-GFP  See text  
XDY7  YEF1820 [pRS316-MYO1-C-TAP]  This study  
XDY41  As YEF473A except MYO1-GFP  See text  
XDY99  YEF1820 [pRS316-MYO1-TD2Δ-C-TAP]  This study  
XDY154  YEF473A [pRS316-MYO1-TD2-GFP]  This studym  
XDY173  a mlc1-11 [pRS316-MYO1-TD2-GFP]  This studym  
XDY189  a myo1-mTD1-GFP BNI5-3HA:His3MX6  This studyn  
XDY190  a myo1-Tail-GFP BNI5-3HA:His3MX6  This studyn  
XDY191  a myo1-TD1-GFP BNI5-3HA:His3MX6  This studyn  
XDY192  a myo1-TD2-GFP BNI5-3HA:His3MX6  This studyn  
XDY194  a myo1-AD-GFP BNI5-3HA:His3MX6  This studyn  
XDY211  a myo1-mTD1-GFP BNI5-mCherry:KanMX6 [pRS316-N-NotI-MYO1]  This studyo  
XDY218  a iqg1Δ::His3MX6 [pRS316-MYO1-TD2-GFP]  This studyp  
XDY254  a MYO1-GFP bni5Δ::His3MX6  This studyn  
XDY257  a myo1-TD2-GFP bni5Δ::His3MX6  This studyn  
XDY258  a myo1-mTD1-GFP bni5Δ::His3MX6  This studyn  
XDY286  a MYO1-GFP CDC3-mCherry:LEU2  This studyq  
XDY287  a bni5Δ::His3MX6 MYO1-GFP CDC3-mCherry:LEU2  This studyq  
XDY288  a myo1-Tail-GFP CDC3-mCherry:LEU2  This studyq  
XDY289  a myo1-TD2Δ-GFP CDC3-mCherry:LEU2  This studyq  
XDY290  a myo1-TD2-GFP CDC3-mCherry:LEU2  This studyq  
XDY295  a iqg1Δ::His3MX6 [pRS316-MYO1-TD2-GFP] [pRS315-IQG1-GST]  This studyp  
XDY296  a iqg1Δ::His3MX6 [pRS316-MYO1-TD2-GFP] [pRS315-IQG1(1-697)-GST]  This studyp  
XDY300  a iqg1Δ::His3MX6 [pRS316-MYO1-TD2-GFP] [pRS315-IQG1(Δ2-411)-GST]  This studyp  
a

Constructed by a PCR-based method (Longtine et al., 1998).

b

Constructed by transforming BglII-digested YIp128-CDC3-mCherry (Gao et al., 2007) into YEF473A and integrating at the CDC3 locus.

c

Constructed by PCR-amplifying CHS2-GFP:HIS3MX6 and MYO2-GFP:HIS3 fragments from YEF5762 and YKT520, respectively, and transforming into YEF5804.

d

Constructed by transforming Y5005-8D with a MYO1-GFP:KanMX6 fragment that was PCR-amplified from YEF2293 (Luo et al., 2004), followed by integration of BglII-digested YIp128-CDC3-mCherry at the CDC3 locus.

e

Constructed by a PCR-based method(Longtine et al., 1998) using plasmids pFA6a-GFP-His3MX6 (Longtine et al., 1998) and pFA6a-GFP-URA3 (provided by C. Burd, University of Pennsylvania, Philadelphia, PA) as templates for tagging MYO1 and NUP57, respectively. The PCR fragments containing MYO1-GFP:His3MX6 and NUP57-GFP:URA3 were transformed sequentially into strain RLY1 (Winter et al., 1999).

f

Constructed by transforming PCR-amplified NUP57-GFP:URA3 from YEF6113 into strains XDY41, YJL488A, YJL335A, YJL222A, and XDY254, respectively.

g

Constructed by transforming PCR-amplified BNI5-mCherry:KanMX6 from XDY211 into XDY41.

h

Constructed by transforming PCR-amplified bni5Δ::His3MX6 from XDY254 into YJL448A and XDY289, respectively.

i

Strain XDY218 was first transformed by BglII-digested YIp128-CDC3-mCherry and then streaked on a SC-Leu + 5-FOA plate to select for the loss of plasmid pRS316-MYO1-TD2-GFP. The resulting strain was then transformed with plasmid pRS316-MYO1-C-GFP.

j

Constructed by streaking XDY211 on a SC + 5-FOA plate to select for the loss of plasmid pRS316-N-NotI-MYO1.

k

Strain RNY1264 (iqg1Δ::His3MX6 MYO1-GFP:KanMX6 [YCp50-IQG1]) was transformed with pRS315-IQG1-GST or pRS315-IQG1(Δ2-411)-GST, and the resulting strains were streaked on a SC-Leu + 5-FOA plate to eliminate YCp50-IQG1.

l

Constructed by transforming BglII-digested YIp211-CDC3-mCherry into strains RNY2594 and RNY2595 and integrating at the CDC3 locus.

m

Constructed by transforming the plasmid into YEF473A and Y5005-8D, respectively.

n

Strains carrying different myo1 alleles were transformed with plasmid pRS316-MYO1. The resulting strains were either 3HA-tagged or deleted for BNI5 using a PCR-based method (Longtine et al., 1998), and then selected for the loss of the MYO1 plasmid by growing cells in non-selective YPD medium.

o

Constructed by transforming a BNI5-mCherry:KanMX6 fragment that was PCR-amplified from plasmid pFA6a-mCherry-KanMX6 into YJL489A carrying plasmid pRS316-N-NotI-MYO1 (Caviston et al., 2003).

p

Strain RNY970 (shown in the table) was streaked from a SC-His plate onto a SC-His + 5-FOA plate; the resulting single colonies were checked by PCR to confirm the loss of the IQG1 plasmid. The resulting iqg1Δ::His3MX6 strain was then transformed with indicated plasmids to generate strains XDY218, XDY295, XDY296, and XDY300.

q

Strains XDY41, XDY287, YJL335A, YJY222A, and YJY488A were transformed with plasmid pRS316-MYO1. The resulting strains were then transformed with BglII-digested integrative plasmid YIp128-CDC3-mCherry and transformants were selected on SC-Leu plates at 25°C and then grown in non-selective YPD medium to lose the MYO1 plasmid.

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