Table 2.
Approaches used to study lipid trafficking in cells
ApproachHow it worksAdvantagesCaveats
Fluorescent lipids -Fluorescent lipids added to cells -Trafficking assessed by microscopy -Monitor trafficking in real time in live cells -Fluorescent groups can alter physical properties and metabolism of lipids -Fluorescent lipids may affect cells 
Labeling & fractionation -Labeled lipid precursors added to cells -Cells fractionated -Allows simultaneous analysis of transport and metabolism -Direct measurement of lipid levels in organelles -Fractionation challenging -Analysis requires cell destruction  
Lipid modification -Lipid modifying enzyme localized in compartment outside synthesis site -Labeled lipid precursors added to cells -Does not require fractionation -Lipid modification must be faster than transport -Modified lipids may affect cells -Requires effective localization of modifying enzyme -Analysis requires cell destruction 
Lipid sensors Fluorescent or luminescent sensors indicate changes in membrane lipid composition  -Monitor trafficking in real time in live cells -Can detect small changes in membrane lipid composition -Factors other than lipid concentration may affect sensor binding -Sensors may perturb membranes 
ApproachHow it worksAdvantagesCaveats
Fluorescent lipids -Fluorescent lipids added to cells -Trafficking assessed by microscopy -Monitor trafficking in real time in live cells -Fluorescent groups can alter physical properties and metabolism of lipids -Fluorescent lipids may affect cells 
Labeling & fractionation -Labeled lipid precursors added to cells -Cells fractionated -Allows simultaneous analysis of transport and metabolism -Direct measurement of lipid levels in organelles -Fractionation challenging -Analysis requires cell destruction  
Lipid modification -Lipid modifying enzyme localized in compartment outside synthesis site -Labeled lipid precursors added to cells -Does not require fractionation -Lipid modification must be faster than transport -Modified lipids may affect cells -Requires effective localization of modifying enzyme -Analysis requires cell destruction 
Lipid sensors Fluorescent or luminescent sensors indicate changes in membrane lipid composition  -Monitor trafficking in real time in live cells -Can detect small changes in membrane lipid composition -Factors other than lipid concentration may affect sensor binding -Sensors may perturb membranes 

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