Table 2. Frequency of the IFNAR1 variant... | Rockefeller University Press

Table 2.

Frequency of the IFNAR1 variant allele and genotypes in Polynesia

				95% CI		Genotype count
Population	Sample size	Allele count	MAF	Lower	Upper	GG	GT	TT	Expected P(TT)
Europe	34,013	0	0.0000	0.0000	0.0001	34,013	0	0	0.00000
East Asia	2,602	0	0.0000	0.0000	0.0007	2,602	0	0	0.00000
Taiwan	19	0	0.0000	0.0000	0.0918	19	0	0	0.00000
Philippines	40	0	0.0000	0.0000	0.0458	40	0	0	0.00000
New Guinea	17	0	0.0000	0.0000	0.1015	17	0	0	0.00000
Bougainville	11	0	0.0000	0.0000	0.1487	11	0	0	0.00000
Vanuatu	179	0	0.0000	0.0000	0.0106	179	0	0	0.00000
Fiji	24	1	0.0208	0.0011	0.1090	23	1	0	0.00043
Tonga	22	0	0.0000	0.0000	0.0803	22	0	0	0.00000
Samoa	1,285	32	0.0125	0.0088	0.0175	1,253	32	0	0.00016
Cook Islands	70	2	0.0143	0.0039	0.0506	68	2	0	0.00020
Society Islands	764	1	0.0007	0.0000	0.0037	763	1	0	0.00000
Austral Islands	211	2	0.0047	0.0013	0.0171	209	2	0	0.00002
Gambier Islands	15	0	0.0000	0.0000	0.1135	15	0	0	0.00000
Tuamotu Islands	165	0	0.0000	0.0000	0.0115	165	0	0	0.00000
Marquesas Islands	199	1	0.0025	0.0001	0.0141	198	1	0	0.00000

				95% CI		Genotype count
Population	Sample size	Allele count	MAF	Lower	Upper	GG	GT	TT	Expected P(TT)
Europe	34,013	0	0.0000	0.0000	0.0001	34,013	0	0	0.00000
East Asia	2,602	0	0.0000	0.0000	0.0007	2,602	0	0	0.00000
Taiwan	19	0	0.0000	0.0000	0.0918	19	0	0	0.00000
Philippines	40	0	0.0000	0.0000	0.0458	40	0	0	0.00000
New Guinea	17	0	0.0000	0.0000	0.1015	17	0	0	0.00000
Bougainville	11	0	0.0000	0.0000	0.1487	11	0	0	0.00000
Vanuatu	179	0	0.0000	0.0000	0.0106	179	0	0	0.00000
Fiji	24	1	0.0208	0.0011	0.1090	23	1	0	0.00043
Tonga	22	0	0.0000	0.0000	0.0803	22	0	0	0.00000
Samoa	1,285	32	0.0125	0.0088	0.0175	1,253	32	0	0.00016
Cook Islands	70	2	0.0143	0.0039	0.0506	68	2	0	0.00020
Society Islands	764	1	0.0007	0.0000	0.0037	763	1	0	0.00000
Austral Islands	211	2	0.0047	0.0013	0.0171	209	2	0	0.00002
Gambier Islands	15	0	0.0000	0.0000	0.1135	15	0	0	0.00000
Tuamotu Islands	165	0	0.0000	0.0000	0.0115	165	0	0	0.00000
Marquesas Islands	199	1	0.0025	0.0001	0.0141	198	1	0	0.00000

MAF of the g.34725076G>T variant (c.1156G>T) in Polynesia, and number of samples evaluated. 95% binomial confidence intervals are shown. The frequencies of the TT genotype are estimated from the allele frequencies and not from the genotype counts.

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