Table 3.
Bioinformatic characteristics and in silico predictions of TPM1 E192K
Bioinformatic parameter typeParameterSource
Minor allele frequency 0.000000 ExAC (Lek et al., 2016) 
No. of HCM cases in OMGL and LMM 13 ACGV (Walsh et al., 2017) 
SIFT score (damaging if <0.05) 0.001/damaging SIFT (Sim et al., 2012) 
PolyPhen-2 score (pathogenic if >0.5) 0.013/benign PolyPhen-2 (Adzhubei et al., 2010) 
PROVEAN score (pathogenic if <-2.5) −2.659/deleterious PROVEAN (Choi et al., 2012) 
Bioinformatic parameter typeParameterSource
Minor allele frequency 0.000000 ExAC (Lek et al., 2016) 
No. of HCM cases in OMGL and LMM 13 ACGV (Walsh et al., 2017) 
SIFT score (damaging if <0.05) 0.001/damaging SIFT (Sim et al., 2012) 
PolyPhen-2 score (pathogenic if >0.5) 0.013/benign PolyPhen-2 (Adzhubei et al., 2010) 
PROVEAN score (pathogenic if <-2.5) −2.659/deleterious PROVEAN (Choi et al., 2012) 

ACGV, Atlas of Cardiac Genetic Variation; ExAC, Exome Aggregation Consortium; LMM, Laboratory of Molecular Medicine; OMGL, Oxford Molecular Genetics Laboratory; PolyPhen-2, Polymorphism Phenotyping v2; PROVEAN, Protein Variation Effect Analyzer; SIFT, Sorting Intolerant From Tolerant.

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