Table 2.
Common transcriptome resources
WebsiteLaboratoryReferenceFocus
http://igc1.salk.edu:3838/astrocyte_aging_transcriptome/ Allen Boisvert et al., 2018  Aging mouse astrocytes, multiple brain areas 
http://www.brainrnaseq.org/ Barres Zhang et al., 2014, 2016; Bennett et al., 2016; Clarke et al., 2018  Glial cell specific in mouse and human; mouse microglia throughout development; aging mouse astrocytes, multiple brain areas 
http://bioinf.nl:8080/GOAD2/ Boddeke Holtman et al., 2015  Repository of multiple other published glia sequencing datasets 
http://shiny.maths.usyd.edu.au/Ellis/MicrogliaPlots Bradshaw  Aged human microglia 
http://astrocyternaseq.org/ Khakh Srinivasan et al., 2016; Chai et al., 2017  Adult mouse brain regional differences in astrocytes 
http://www.mousebrain.org/ Linnarsson Zeisel et al., 2018  Single-cell analysis of many cell types from different brain regions and developmental stages of the mouse 
http://www.dropviz.org/ McCarroll Saunders et al., 2018  Single-cell analysis of many cell types from different mouse brain regions 
https://astrocyte.rnaseq.sofroniewlab.neurobio.ucla.edu/ Sofroniew Anderson et al., 2016  Mouse astrocyte reactivity in spinal cord injury and inflammation 
http://www.microgliasinglecell.com/ Stevens/McCarroll Hammond et al., 2018  Single cell microglia during age, by sex, and in demyelinating disease model 
WebsiteLaboratoryReferenceFocus
http://igc1.salk.edu:3838/astrocyte_aging_transcriptome/ Allen Boisvert et al., 2018  Aging mouse astrocytes, multiple brain areas 
http://www.brainrnaseq.org/ Barres Zhang et al., 2014, 2016; Bennett et al., 2016; Clarke et al., 2018  Glial cell specific in mouse and human; mouse microglia throughout development; aging mouse astrocytes, multiple brain areas 
http://bioinf.nl:8080/GOAD2/ Boddeke Holtman et al., 2015  Repository of multiple other published glia sequencing datasets 
http://shiny.maths.usyd.edu.au/Ellis/MicrogliaPlots Bradshaw  Aged human microglia 
http://astrocyternaseq.org/ Khakh Srinivasan et al., 2016; Chai et al., 2017  Adult mouse brain regional differences in astrocytes 
http://www.mousebrain.org/ Linnarsson Zeisel et al., 2018  Single-cell analysis of many cell types from different brain regions and developmental stages of the mouse 
http://www.dropviz.org/ McCarroll Saunders et al., 2018  Single-cell analysis of many cell types from different mouse brain regions 
https://astrocyte.rnaseq.sofroniewlab.neurobio.ucla.edu/ Sofroniew Anderson et al., 2016  Mouse astrocyte reactivity in spinal cord injury and inflammation 
http://www.microgliasinglecell.com/ Stevens/McCarroll Hammond et al., 2018  Single cell microglia during age, by sex, and in demyelinating disease model 

Additional datasets for non-glial CNS cells are reviewed in Keil et al., 2018.

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