Table 3.
ANCOM significant differences in fecal microbiota at week 7 (FDR P < 0.05)
Higher in ABX+FMTLower in ABX+FMT
Tg-donor vs. ABX+FMT   
ESV p_Bacteroidetes; c_Bacteroidia; f_S24-7; g_ (×2)  
L7 clustered taxa p_Bacteroidetes;c_Bacteroidia;f_Bacteroidaceae;g_Bacteroides;s_  
ABX+Vehicle vs. ABX+FMT   
ESV p_Bacteroidetes; c_Bacteroidia; f_S24-7; g_ (×2) p_Bacteroidetes; c_Bacteroidia; f_S24-7; g_; s_ 
p_Bacteroidetes; c_Bacteroidia; f_Prevotellaceae; g_Prevotella; s_  
p_Bacteroidetes; c_Bacteroidia; f_Bacteroidaceae; g_Bacteroides  
p_Bacteroidetes; c_Bacteroidia; f_Bacteroidaceae; g_Bacteroides; s_  
L7 clustered taxa p_Bacteroidetes;c_Bacteroidia;f_Bacteroidaceae;g_Bacteroides;s_  
p_Bacteroidetes;c_Bacteroidia;f_Bacteroidaceae;g_Bacteroides;s_g_Odoribacter;s_  
p_Bacteroidetes;c_Bacteroidia;f_[Paraprevotellaceae];g_Paraprevotella;s_  
p_Deferribacteres;c_Deferribacteres;f_Deferribacteraceae;g_Mucispirillum;s_schaedleri  
p_Firmicutes;c_Clostridia;f_Ruminococcaceae;g_Ruminococcus;s_  
p_Proteobacteria;c_Alphaproteobacteria;o_RF32;f_;g_;s_  
p_Proteobacteria;c_Deltaproteobacteria;f_Desulfovibrionaceae;g_;s_  
Higher in ABX+FMTLower in ABX+FMT
Tg-donor vs. ABX+FMT   
ESV p_Bacteroidetes; c_Bacteroidia; f_S24-7; g_ (×2)  
L7 clustered taxa p_Bacteroidetes;c_Bacteroidia;f_Bacteroidaceae;g_Bacteroides;s_  
ABX+Vehicle vs. ABX+FMT   
ESV p_Bacteroidetes; c_Bacteroidia; f_S24-7; g_ (×2) p_Bacteroidetes; c_Bacteroidia; f_S24-7; g_; s_ 
p_Bacteroidetes; c_Bacteroidia; f_Prevotellaceae; g_Prevotella; s_  
p_Bacteroidetes; c_Bacteroidia; f_Bacteroidaceae; g_Bacteroides  
p_Bacteroidetes; c_Bacteroidia; f_Bacteroidaceae; g_Bacteroides; s_  
L7 clustered taxa p_Bacteroidetes;c_Bacteroidia;f_Bacteroidaceae;g_Bacteroides;s_  
p_Bacteroidetes;c_Bacteroidia;f_Bacteroidaceae;g_Bacteroides;s_g_Odoribacter;s_  
p_Bacteroidetes;c_Bacteroidia;f_[Paraprevotellaceae];g_Paraprevotella;s_  
p_Deferribacteres;c_Deferribacteres;f_Deferribacteraceae;g_Mucispirillum;s_schaedleri  
p_Firmicutes;c_Clostridia;f_Ruminococcaceae;g_Ruminococcus;s_  
p_Proteobacteria;c_Alphaproteobacteria;o_RF32;f_;g_;s_  
p_Proteobacteria;c_Deltaproteobacteria;f_Desulfovibrionaceae;g_;s_  

To determine the taxa that described the most variance between groups, ANCOM analyses of 16S rRNA sequencing data at the DADA2-inferred ESV level (taxonomy assigned via Greengenes) and clustered species levels were performed between vehicle-treated or FMT-treated ABX-treated male mice at the age of 7 wk. ABX+FMT, FMT (from Tg-donor)-gavaged ABX-treated male mice; ABX+Vehicle, vehicle-gavaged ABX-treated male mice.

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