Table 1.
Contrast between principles of encoded immunity and conventional precepts of antimicrobial drug development
IssuePrinciple of encoded immunityPharmaceutical precept constraining development of antimicrobial agents as an element of adopted immunity
Target essentiality Targets essential to the pathogen under conditions pertaining in the host Targets essential under standard growth conditions in the laboratory 
Target selectivity Multiple targets of ROS, RNS, CO, AMPs Single target 
Target conservation Targets often present in host as well as in pathogen Target absent in host 
Suitable target classes Many: synthesis of nucleic acids, proteins, cell walls, or folate, but also induction, synthesis, secretion, or action of virulence factors; energy generation; ion gradients; transport; signaling; processing; repair; degradation; sequestration Few: Synthesis of nucleic acids, proteins, cell walls, or folate 
Microbial species specificity Combination of broad spectrum and narrow spectrum Broad spectrum 
Host toxicity Inescapable; almost always manageable and reparable Forbidden when predictable 
Genotoxicity Inescapable; very rarely consequential Forbidden 
IssuePrinciple of encoded immunityPharmaceutical precept constraining development of antimicrobial agents as an element of adopted immunity
Target essentiality Targets essential to the pathogen under conditions pertaining in the host Targets essential under standard growth conditions in the laboratory 
Target selectivity Multiple targets of ROS, RNS, CO, AMPs Single target 
Target conservation Targets often present in host as well as in pathogen Target absent in host 
Suitable target classes Many: synthesis of nucleic acids, proteins, cell walls, or folate, but also induction, synthesis, secretion, or action of virulence factors; energy generation; ion gradients; transport; signaling; processing; repair; degradation; sequestration Few: Synthesis of nucleic acids, proteins, cell walls, or folate 
Microbial species specificity Combination of broad spectrum and narrow spectrum Broad spectrum 
Host toxicity Inescapable; almost always manageable and reparable Forbidden when predictable 
Genotoxicity Inescapable; very rarely consequential Forbidden 

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