Table 1. MAIT TCR usage and sequences... | Rockefeller University Press

Table 1.

MAIT TCR usage and sequences

TCR (name)	TRAJ	CDR3α	TRBJ	TRBV	CDR1β	CDR2β	CDR3β
WT (A-F7)	33	⁸⁹AVKDSNYQLI⁹⁸	2-2	6-1	²⁷MNHNS³¹	⁴⁹SASEGT⁵⁴	⁹²ASSVWTGEGSGELF¹⁰⁵
B-B10	33	⁸⁹AGMDSNYQLI⁹⁸	1-5	6-1	²⁷MNHNS³¹	⁴⁹SASEGT⁵⁴	⁹²ASTLGQEGQPQH¹⁰³
B-F3-C1	33	⁸⁹ASIDSNYQLI⁹⁸	2-2	6-1	²⁷MNHNS³¹	⁴⁹SASEGT⁵⁴	⁹²ASSETDPNTGELF¹⁰⁴
B-G8	33	⁸⁹AAMDSNYQLI⁹⁸	2-2	6-1	²⁷MNHNS³¹	⁴⁹SASEGT⁵⁴	⁹²ASSGGDSGELF¹⁰²
B-C10	33	⁸⁹AAEDSNYQLI⁹⁸	2-6	6-1	²⁷MNHNS³¹	⁴⁹SASEGT⁵⁴	⁹²ASSYEVSGANVLT¹⁰⁴
C-C10	33	⁸⁹AVVDSNYQLI⁹⁸	2-3	6-1	²⁷MNHNS³¹	⁴⁹SASEGT⁵⁴	⁹²ASSPPGGTDTQ*Y¹⁰³
C-A11	33	⁸⁹AVRDSNYQLI⁹⁸	1-3	6-1	²⁷MNHNS³¹	⁴⁹SASEGT⁵⁴	⁹²ASSAAVEGGNTIY¹⁰⁴
#1	12	⁸⁹AVMDSSYKLI⁹⁸	2-1	6-4	²⁷MRHNA³¹	⁴⁹SNTAGT⁵⁴	^{92ASSRGDYNEQF102}
#2	12	⁸⁹AVMDSSYKLI⁹⁸	2-1	6-4	²⁷MRHNA³¹	⁴⁹SNTAGT⁵⁴	^{92ASSASGGAYNEQF104}
#3	12	⁸⁹AVMDSSYKLI⁹⁸	2-3	6-4	²⁷MRHNA³¹	⁴⁹SNTAGT⁵⁴	^{92ASSPGTSGGADTQY105}
#4	20	⁸⁹AVRDGDYKLS⁹⁸	2-2	6-4	²⁷MRHNA³¹	⁴⁹SNTAGT⁵⁴	^{92ASSAGASTGELF103}
#5	33	⁸⁹AVSDSNYQLI⁹⁸	2-2	6-4	²⁷MRHNA³¹	⁴⁹SNTAGT⁵⁴	^{92ASSDSGGGTGELF104}
#6	33	⁸⁹AVMDSNYQLI⁹⁸	2-1	6-4	²⁷MRHNA³¹	⁴⁹SNTAGT⁵⁴	⁹²ASSGGTNNEQF¹⁰²
C-F7	33	⁸⁹AFMDSNYQLI⁹⁸	2-1	20	²⁷DFQATT³²	⁵⁰SNEGSKA⁵⁶	⁹⁵SARTSGDFGEQF¹⁰⁷

TCR (name)	TRAJ	CDR3α	TRBJ	TRBV	CDR1β	CDR2β	CDR3β
WT (A-F7)	33	⁸⁹AVKDSNYQLI⁹⁸	2-2	6-1	²⁷MNHNS³¹	⁴⁹SASEGT⁵⁴	⁹²ASSVWTGEGSGELF¹⁰⁵
B-B10	33	⁸⁹AGMDSNYQLI⁹⁸	1-5	6-1	²⁷MNHNS³¹	⁴⁹SASEGT⁵⁴	⁹²ASTLGQEGQPQH¹⁰³
B-F3-C1	33	⁸⁹ASIDSNYQLI⁹⁸	2-2	6-1	²⁷MNHNS³¹	⁴⁹SASEGT⁵⁴	⁹²ASSETDPNTGELF¹⁰⁴
B-G8	33	⁸⁹AAMDSNYQLI⁹⁸	2-2	6-1	²⁷MNHNS³¹	⁴⁹SASEGT⁵⁴	⁹²ASSGGDSGELF¹⁰²
B-C10	33	⁸⁹AAEDSNYQLI⁹⁸	2-6	6-1	²⁷MNHNS³¹	⁴⁹SASEGT⁵⁴	⁹²ASSYEVSGANVLT¹⁰⁴
C-C10	33	⁸⁹AVVDSNYQLI⁹⁸	2-3	6-1	²⁷MNHNS³¹	⁴⁹SASEGT⁵⁴	⁹²ASSPPGGTDTQ*Y¹⁰³
C-A11	33	⁸⁹AVRDSNYQLI⁹⁸	1-3	6-1	²⁷MNHNS³¹	⁴⁹SASEGT⁵⁴	⁹²ASSAAVEGGNTIY¹⁰⁴
#1	12	⁸⁹AVMDSSYKLI⁹⁸	2-1	6-4	²⁷MRHNA³¹	⁴⁹SNTAGT⁵⁴	^{92ASSRGDYNEQF102}
#2	12	⁸⁹AVMDSSYKLI⁹⁸	2-1	6-4	²⁷MRHNA³¹	⁴⁹SNTAGT⁵⁴	^{92ASSASGGAYNEQF104}
#3	12	⁸⁹AVMDSSYKLI⁹⁸	2-3	6-4	²⁷MRHNA³¹	⁴⁹SNTAGT⁵⁴	^{92ASSPGTSGGADTQY105}
#4	20	⁸⁹AVRDGDYKLS⁹⁸	2-2	6-4	²⁷MRHNA³¹	⁴⁹SNTAGT⁵⁴	^{92ASSAGASTGELF103}
#5	33	⁸⁹AVSDSNYQLI⁹⁸	2-2	6-4	²⁷MRHNA³¹	⁴⁹SNTAGT⁵⁴	^{92ASSDSGGGTGELF104}
#6	33	⁸⁹AVMDSNYQLI⁹⁸	2-1	6-4	²⁷MRHNA³¹	⁴⁹SNTAGT⁵⁴	⁹²ASSGGTNNEQF¹⁰²
C-F7	33	⁸⁹AFMDSNYQLI⁹⁸	2-1	20	²⁷DFQATT³²	⁵⁰SNEGSKA⁵⁶	⁹⁵SARTSGDFGEQF¹⁰⁷

J segments as part of the CDR regions are shown in italics; N regions (known for sequences reported here (MAIT #1-5) or previously (MAIT #6; Reantragoon et al., 2012) are shown in bold. Sequence numbering is indicated. *, Q in TRBJ2-3 but R in Tilloy et al. (1999).

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