Association of IL28B polymorphisms with HCV clearance in chronic hepatitis C
| Response to treatment | Genotype | NR | SVR | Prop. SVRb | Univariate models | Multivariate modelsd | ||
| OR(95% CI) | P | OR (95% CI) | P | |||||
| All viral genotypesa (n = 540) | ||||||||
| TT/-G | TT/TT | 37 | 152 | 0.80 | ||||
| TT/-G | 131 | 161 | 0.55 | |||||
| -G/-G | 35 | 24 | 0.41 | 0.38 (0.28–0.51) | 2.51−10 | 0.27 (0.17–0.45) | 2.70−7 | |
| rs12979860 | CC | 43 | 146 | 0.77 | ||||
| CT | 126 | 163 | 0.56 | |||||
| TT | 34 | 28 | 0.45 | 0.46 (0.35–0.62) | 1.52−7 | 0.37 (0.23–0.59) | 2.47−5 | |
| Viral genotype 1 and 4a (n= 288) | ||||||||
| TT/-G | TT/TT | 22 | 60 | 0.73 | ||||
| TT/-G | 112 | 62 | 0.36 | |||||
| -G/-G | 26 | 6 | 0.19 | 0.25 (0.16–0.40) | 4.61−9 | 0.16 (0.08–0.33) | 2.75−7 | |
| rs12979860 | CC | 24 | 56 | 0.70 | ||||
| CT | 109 | 64 | 0.37 | |||||
| TT | 27 | 8 | 0.23 | 0.31 (0.20–0.49) | 2.24−7 | 0.22 (0.11–0.41) | 3.46−6 | |
| Viral genotype 2 and 3c (n = 252) | ||||||||
| TT/-G | TT/TT | 15 | 92 | 0.86 | ||||
| TT/-G | 19 | 99 | 0.84 | |||||
| -G/-G | 9 | 18 | 0.67 | 0.36 (0.15–0.86) | 2.13−2 | 1.33 (0.22–7.94) | 7.57−1 | |
| rs12979860 | CC | 19 | 90 | 0.83 | ||||
| CT | 17 | 99 | 0.85 | |||||
| TT | 7 | 20 | 0.74 | 0.54 (0.21–1.38) | 2.01−1 | 1.48 (0.26–8.53) | 6.59−1 | |
| Spontaneous clearance (n = 633)a | Genotype | CRI | SC | OR(95% CI) | P | OR (95% CI) | P | |
| TT/-G | TT/TT | 189 | 63 | |||||
| TT/-G | 292 | 29 | ||||||
| -G/-G | 59 | 1 | 0.28 (0.18–0.43) | 8.68−9 | 0.30 (0.19–0.47) | 1.54−7 | ||
| rs12979860 | CC | 189 | 62 | |||||
| CT | 289 | 30 | ||||||
| TT | 62 | 1 | 0.29 (0.19–0.45) | 1.66−8 | 0.31 (0.20–0.49) | 3.64−7 | ||
| Response to treatment | Genotype | NR | SVR | Prop. SVRb | Univariate models | Multivariate modelsd | ||
| OR(95% CI) | P | OR (95% CI) | P | |||||
| All viral genotypesa (n = 540) | ||||||||
| TT/-G | TT/TT | 37 | 152 | 0.80 | ||||
| TT/-G | 131 | 161 | 0.55 | |||||
| -G/-G | 35 | 24 | 0.41 | 0.38 (0.28–0.51) | 2.51−10 | 0.27 (0.17–0.45) | 2.70−7 | |
| rs12979860 | CC | 43 | 146 | 0.77 | ||||
| CT | 126 | 163 | 0.56 | |||||
| TT | 34 | 28 | 0.45 | 0.46 (0.35–0.62) | 1.52−7 | 0.37 (0.23–0.59) | 2.47−5 | |
| Viral genotype 1 and 4a (n= 288) | ||||||||
| TT/-G | TT/TT | 22 | 60 | 0.73 | ||||
| TT/-G | 112 | 62 | 0.36 | |||||
| -G/-G | 26 | 6 | 0.19 | 0.25 (0.16–0.40) | 4.61−9 | 0.16 (0.08–0.33) | 2.75−7 | |
| rs12979860 | CC | 24 | 56 | 0.70 | ||||
| CT | 109 | 64 | 0.37 | |||||
| TT | 27 | 8 | 0.23 | 0.31 (0.20–0.49) | 2.24−7 | 0.22 (0.11–0.41) | 3.46−6 | |
| Viral genotype 2 and 3c (n = 252) | ||||||||
| TT/-G | TT/TT | 15 | 92 | 0.86 | ||||
| TT/-G | 19 | 99 | 0.84 | |||||
| -G/-G | 9 | 18 | 0.67 | 0.36 (0.15–0.86) | 2.13−2 | 1.33 (0.22–7.94) | 7.57−1 | |
| rs12979860 | CC | 19 | 90 | 0.83 | ||||
| CT | 17 | 99 | 0.85 | |||||
| TT | 7 | 20 | 0.74 | 0.54 (0.21–1.38) | 2.01−1 | 1.48 (0.26–8.53) | 6.59−1 | |
| Spontaneous clearance (n = 633)a | Genotype | CRI | SC | OR(95% CI) | P | OR (95% CI) | P | |
| TT/-G | TT/TT | 189 | 63 | |||||
| TT/-G | 292 | 29 | ||||||
| -G/-G | 59 | 1 | 0.28 (0.18–0.43) | 8.68−9 | 0.30 (0.19–0.47) | 1.54−7 | ||
| rs12979860 | CC | 189 | 62 | |||||
| CT | 289 | 30 | ||||||
| TT | 62 | 1 | 0.29 (0.19–0.45) | 1.66−8 | 0.31 (0.20–0.49) | 3.64−7 | ||
CRI, chronic infection; SC, spontaneous clearance; NR, nonresponse to treatment; OR, odds ratio; CI, confidence interval; Prop, proportion.
Odd ratios and p-values are for an additive model, accounting for increased effect of one or two copies of the mutant allele.
Data indicate the proportion of patients with SVR for indicated host and viral genotypes.
Odd ratios and p-values are for a recessive model, comparing the presence of two copies versus zero or one copies of the mutant allele.
Multivariate models are adjusted for age and sex (spontaneous clearance), as well as HCV RNA level, fibrosis stage, and, whenever appropriate, viral genotype (response to treatment). Multivariate models include a smaller number of patients, due to missing covariates in some patients (n = 360 for all genotypes, n = 195 for genotypes 1 and 4, and n = 165 for genotypes 2 and 3). However, the results of univariate analyses restricted to the subset of individuals with all covariates were concordant with those of the whole group.