Table 1.

Summary of the main pathways dysregulated in S63del nerves

 P5 P-value P28 P-value 4 mo P-value 
Up-regulated pathways UPR (stress) 2.1e-15 UPR (stress) 1.8e-7 Inflammation 2.7e-6 
   Cell death 2.9e-5 Cell death 4.4e-4 
     UPR (stress) 2.1e-3 
 Early TFa (Oct6, Id2, Sox2)  Early TFa (Oct6, Id2, Sox2, c-Jun)  Early TF* (Oct6, Id2, Sox2, c-Jun)  
Down-regulated pathways Lipid biosynthesis 1.4e-35 Lipid biosynthesis 1.8e-7 Lipid biosynthesis 8.9e-4 
 Sterol biosynthesis 5.6e-28 Sterol biosynthesis 2.7e-7 Sterol biosynthesis 4.7e-3 
 Cholesterol biosynthesis 3.0e-26 Cholesterol biosynthesis 1.6e-4 Cholesterol biosynthesis 6.6e-3 
 P5 P-value P28 P-value 4 mo P-value 
Up-regulated pathways UPR (stress) 2.1e-15 UPR (stress) 1.8e-7 Inflammation 2.7e-6 
   Cell death 2.9e-5 Cell death 4.4e-4 
     UPR (stress) 2.1e-3 
 Early TFa (Oct6, Id2, Sox2)  Early TFa (Oct6, Id2, Sox2, c-Jun)  Early TF* (Oct6, Id2, Sox2, c-Jun)  
Down-regulated pathways Lipid biosynthesis 1.4e-35 Lipid biosynthesis 1.8e-7 Lipid biosynthesis 8.9e-4 
 Sterol biosynthesis 5.6e-28 Sterol biosynthesis 2.7e-7 Sterol biosynthesis 4.7e-3 
 Cholesterol biosynthesis 3.0e-26 Cholesterol biosynthesis 1.6e-4 Cholesterol biosynthesis 6.6e-3 

Results are based on manual categorization and L2L analysis.

a

Arbitrary category, not present in L2L or GO. For this reason, Early TF have no p-values.

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