HAV class II epitopes
| Class II epitope | HAV protein | |
| 4X0293 | ||
| EKFFLIHSADWLTTHALFHE | VP281 | |
| LRYHTYARFGIEIQVQINPT | VP2121 | |
| LLNCNINNVVRIKVPFIYTR | VP2171 | |
| YHSGRLLFCFVPGNELIDVS | VP3371 | |
| SDHMSIYKFMGRSHFLCTFT | VP1571 | |
| DKTDSTFGLVSIQIANYNHS | VP1711 | |
| ESHIECRKPYKELRLEVGKQ | pX791 | |
| RLKYAQEELSNEVLPPPRKM | pX811 | |
| LFYTEEHEMMKFSWRGVTAD | 2B841 | |
| CFLLHWLNPKKINLADRMLG | 2B951 | |
| YVDIGCSVISCGKVFSKMLE | 2B1051 | |
| VHLSPLRDCIARVHQKLKNL | 2C1191 | |
| GFINQAMVTRCEPVVCYLHG | 2C1211 | |
| KRGGGKSLTSIALATKICKH | 2C1231 | |
| GCPMRLNMASLEEKGRHFSS | 2C1301 | |
| NPSPKTVYVKEAIDRRLHFK | 2C1331 | |
| GFFQSVTNHKWVAVGAAVGI | 3A1451 | |
| DADPVESQSTLEIAGLVRKN | 3B1511 | |
| GVKDDWLLVPSHAYKFEKDY | 3C1551 | |
| QDVVLMKVPTIPKFRDITEH | 3C1601 | |
| YVHKKNDGTTVDLTVDQAWR | 3C1661 | |
| AGGNSILVAKLVTQEMFQNI | 3C1711 | |
| VVSKTLFRKSPIYHHIDKTM | 3D1751 | |
| LLGVHPRLAQRILFNTVMME | 3D1871 | |
| IDACPLDYTILCRMYWGPAI | 3D1921 | |
| SKIFGKSPVFFCQALKILCY | 3D2061 | |
| NVPQLKPVSELTFLKRSFNL | 3D2121 | |
| LENAQWFAFMHGYEFYQKFY | 3D2171 | |
| 4X0395 | ||
| SSVHTAEVGSHQVEPLRTSV | VP251 | |
| MVPGDQSYGSIASLTVYPHG | VP2151 | |
| RIKVPFIYTRGAYHFKDPQY | VP2181 | |
| FRVSTTENVVNLSNYEDARA | VP3251 | |
| KMSFALDQEDWKSDPSQGGG | VP3271 | |
| SIPTLAAQFPFNASDSVGQQ | VP3301 | |
| VFDFQVFPTKYHSGRLLFCF | VP3361 | |
| PCAVMDITGVQSTLRFRVPW | VP3401 | |
| VASHVRVNVYLSAINLECFA | VP3461 | |
| SDHMSIYKFMGRSHFLCTFT | VP1571 | |
| FNSNNKEYTFPITLSSTSNP | VP1591 | |
| ATDVDGMAWFTPVGLAVDTP | VP1641 | |
| DKTDSTFGLVSIQIANYNHS | VP1711 | |
| ESHIECRKPYKELRLEVGKQ | pX791 | |
| LFYTEEHEMMKFSWRGVTAD | 2B841 | |
| TRALRRFGFSLAAGRSVWTL | 2B861 | |
| EMDAGVLTGRLIRLNDEKWT | 2B881 | |
| KINLADRMLGLSGVQEIKEQ | 2B961 | |
| CGKVFSKMLETVFNWQMDSR | 2B1061 | |
| YGVEPEKNIYTKPVASDYWD | 2C1251 | |
| NPSPKTVYVKEAIDRRLHFK | 2C1331 | |
| SQGISDDNDSAVAEFFQSFP | 2C1421 | |
| AVAEFFQSFPSGEPSNSKLS | 3A1431 | |
| GFFQSVTNHKWVAVGAAVGI | 3A1451 | |
| GVKDDWLLVPSHAYKFEKDY | 3C1551 | |
| GTYYSISAGNVVIQSLDVGF | 3C1581 | |
| VNGTPMLISEGPLKMEEKAT | 3C1641 | |
| VDLTVDQAWRGKGEGLPGMC | 3C1671 | |
| AGGNSILVAKLVTQEMFQNI | 3C1711 | |
| AINMDSSPGFPYVQEKLTKR | 3D1841 | |
| GDDVLIVFSRDVQIDNLDLI | 3D2081 | |
| LENAQWFAFMHGYEFYQKFY | 3D2171 | |
| YFVQSCLEKEMIEYRLKSYD | 3D2191 | |
| WWRMRFYDQCFICDLS | 3D2211 |
| Class II epitope | HAV protein | |
| 4X0293 | ||
| EKFFLIHSADWLTTHALFHE | VP281 | |
| LRYHTYARFGIEIQVQINPT | VP2121 | |
| LLNCNINNVVRIKVPFIYTR | VP2171 | |
| YHSGRLLFCFVPGNELIDVS | VP3371 | |
| SDHMSIYKFMGRSHFLCTFT | VP1571 | |
| DKTDSTFGLVSIQIANYNHS | VP1711 | |
| ESHIECRKPYKELRLEVGKQ | pX791 | |
| RLKYAQEELSNEVLPPPRKM | pX811 | |
| LFYTEEHEMMKFSWRGVTAD | 2B841 | |
| CFLLHWLNPKKINLADRMLG | 2B951 | |
| YVDIGCSVISCGKVFSKMLE | 2B1051 | |
| VHLSPLRDCIARVHQKLKNL | 2C1191 | |
| GFINQAMVTRCEPVVCYLHG | 2C1211 | |
| KRGGGKSLTSIALATKICKH | 2C1231 | |
| GCPMRLNMASLEEKGRHFSS | 2C1301 | |
| NPSPKTVYVKEAIDRRLHFK | 2C1331 | |
| GFFQSVTNHKWVAVGAAVGI | 3A1451 | |
| DADPVESQSTLEIAGLVRKN | 3B1511 | |
| GVKDDWLLVPSHAYKFEKDY | 3C1551 | |
| QDVVLMKVPTIPKFRDITEH | 3C1601 | |
| YVHKKNDGTTVDLTVDQAWR | 3C1661 | |
| AGGNSILVAKLVTQEMFQNI | 3C1711 | |
| VVSKTLFRKSPIYHHIDKTM | 3D1751 | |
| LLGVHPRLAQRILFNTVMME | 3D1871 | |
| IDACPLDYTILCRMYWGPAI | 3D1921 | |
| SKIFGKSPVFFCQALKILCY | 3D2061 | |
| NVPQLKPVSELTFLKRSFNL | 3D2121 | |
| LENAQWFAFMHGYEFYQKFY | 3D2171 | |
| 4X0395 | ||
| SSVHTAEVGSHQVEPLRTSV | VP251 | |
| MVPGDQSYGSIASLTVYPHG | VP2151 | |
| RIKVPFIYTRGAYHFKDPQY | VP2181 | |
| FRVSTTENVVNLSNYEDARA | VP3251 | |
| KMSFALDQEDWKSDPSQGGG | VP3271 | |
| SIPTLAAQFPFNASDSVGQQ | VP3301 | |
| VFDFQVFPTKYHSGRLLFCF | VP3361 | |
| PCAVMDITGVQSTLRFRVPW | VP3401 | |
| VASHVRVNVYLSAINLECFA | VP3461 | |
| SDHMSIYKFMGRSHFLCTFT | VP1571 | |
| FNSNNKEYTFPITLSSTSNP | VP1591 | |
| ATDVDGMAWFTPVGLAVDTP | VP1641 | |
| DKTDSTFGLVSIQIANYNHS | VP1711 | |
| ESHIECRKPYKELRLEVGKQ | pX791 | |
| LFYTEEHEMMKFSWRGVTAD | 2B841 | |
| TRALRRFGFSLAAGRSVWTL | 2B861 | |
| EMDAGVLTGRLIRLNDEKWT | 2B881 | |
| KINLADRMLGLSGVQEIKEQ | 2B961 | |
| CGKVFSKMLETVFNWQMDSR | 2B1061 | |
| YGVEPEKNIYTKPVASDYWD | 2C1251 | |
| NPSPKTVYVKEAIDRRLHFK | 2C1331 | |
| SQGISDDNDSAVAEFFQSFP | 2C1421 | |
| AVAEFFQSFPSGEPSNSKLS | 3A1431 | |
| GFFQSVTNHKWVAVGAAVGI | 3A1451 | |
| GVKDDWLLVPSHAYKFEKDY | 3C1551 | |
| GTYYSISAGNVVIQSLDVGF | 3C1581 | |
| VNGTPMLISEGPLKMEEKAT | 3C1641 | |
| VDLTVDQAWRGKGEGLPGMC | 3C1671 | |
| AGGNSILVAKLVTQEMFQNI | 3C1711 | |
| AINMDSSPGFPYVQEKLTKR | 3D1841 | |
| GDDVLIVFSRDVQIDNLDLI | 3D2081 | |
| LENAQWFAFMHGYEFYQKFY | 3D2171 | |
| YFVQSCLEKEMIEYRLKSYD | 3D2191 | |
| WWRMRFYDQCFICDLS | 3D2211 |