Contacts of Hy.1B11 TCR with HLA-DQ1
| CDR | TCR residue | DQ1 residue | Number of contacts |
| Contacts of TCR with HLA-DQ1α | |||
| CDR3α | G96 | Q57 | 2 |
| CDR3α | G96 | G58* | 2 |
| CDR3α | N97 | D55 | 2 |
| CDR3α | N97 | Q57 | 3 |
| CDR3α | E98 | R61** | 11 |
| CDR2β | Y46 | R61 | 1 |
| CDR2β | Q48 | R61 | 1 |
| CDR2β | Q48 | A64 | 1 |
| CDR2β | Q48 | V65 | 4 |
| CDR2β | G49 | H68 | 3 |
| CDR2β | T50 | H68* | 4 |
| CDR2β | A52 | A64 | 1 |
| CDR2β | A53 | A64 | 3 |
| CDR2β | A53 | R61 | 1 |
| CDR2β | A53 | Q57* | 2 |
| CDR2β | A53 | L60 | 1 |
| CDR2β | D54 | Q57 | 4 |
| CDR3β | L95 | R61 | 1 |
| Contacts of TCR with HLA-DQ1β | |||
| CDR3β | A94 | E66 | 3 |
| CDR3β | L95 | E66 | 2 |
| CDR | TCR residue | DQ1 residue | Number of contacts |
| Contacts of TCR with HLA-DQ1α | |||
| CDR3α | G96 | Q57 | 2 |
| CDR3α | G96 | G58* | 2 |
| CDR3α | N97 | D55 | 2 |
| CDR3α | N97 | Q57 | 3 |
| CDR3α | E98 | R61** | 11 |
| CDR2β | Y46 | R61 | 1 |
| CDR2β | Q48 | R61 | 1 |
| CDR2β | Q48 | A64 | 1 |
| CDR2β | Q48 | V65 | 4 |
| CDR2β | G49 | H68 | 3 |
| CDR2β | T50 | H68* | 4 |
| CDR2β | A52 | A64 | 1 |
| CDR2β | A53 | A64 | 3 |
| CDR2β | A53 | R61 | 1 |
| CDR2β | A53 | Q57* | 2 |
| CDR2β | A53 | L60 | 1 |
| CDR2β | D54 | Q57 | 4 |
| CDR3β | L95 | R61 | 1 |
| Contacts of TCR with HLA-DQ1β | |||
| CDR3β | A94 | E66 | 3 |
| CDR3β | L95 | E66 | 2 |
*, Putative hydrogen bond; **, two putative hydrogen bonds.