Table 2.
Useful known samples for imaging system validation
SampleErrorReferences for correction protocols
(a) Fluorescent microspheres (beads) that are below the diffraction resolution limit of the imaging system Optical aberrations Hiraoka et al., 1990; Goodwin, 2013  
(b and c) Multi-wavelength beads below the diffraction resolution limit of the imaging system Channel registration Hibbs et al., 2006; Spiering et al., 2013; Wolf et al., 2013  
(d) Stage micrometer In magnification/pixel size Wolf et al., 2013  
Flatfield slide Nonuniform illumination Model, 2006  
Single-labeled biological sample Bleed-through Spiering et al., 2013  
Bolte and Cordelières, 2006  
Stable biological sample Photobleaching Bancaud et al., 2010  
Unlabeled biological sample Autofluorescence Hibbs et al., 2006  
SampleErrorReferences for correction protocols
(a) Fluorescent microspheres (beads) that are below the diffraction resolution limit of the imaging system Optical aberrations Hiraoka et al., 1990; Goodwin, 2013  
(b and c) Multi-wavelength beads below the diffraction resolution limit of the imaging system Channel registration Hibbs et al., 2006; Spiering et al., 2013; Wolf et al., 2013  
(d) Stage micrometer In magnification/pixel size Wolf et al., 2013  
Flatfield slide Nonuniform illumination Model, 2006  
Single-labeled biological sample Bleed-through Spiering et al., 2013  
Bolte and Cordelières, 2006  
Stable biological sample Photobleaching Bancaud et al., 2010  
Unlabeled biological sample Autofluorescence Hibbs et al., 2006  

We used (a) Molecular Probes FluoSpheres; (b) for high-resolution imaging, Invitrogen TetraSpeck Microspheres, 0.1 µm; (c) for low-resolution imaging, Invitrogen FocalCheck Beads, 6 µm or 15 µm; and (d) MicroScope World, 25 mm KR812.

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