Table 1.

X-Ray diffraction data and structure refinement

Crystal Native Dehydrated 
Data collection   
Space group P212121 P212121 
Cell dimensions   
a, b, c (Å) 126.8, 131.4, 190.2 126.9, 119.8, 182.3 
α, β, γ (°) 90, 90, 90 90, 90, 90 
Resolution range (Å) 50.0–2.75 50–2.9 
CC1/2b 99.7 (13.4)a 98.7 (11.8)a 
Rmerge (%)c 11 (305.7) 26.5 (449.3) 
I/σ (I) 10 (0.4) 7.96 (0.35) 
Completeness (%) 98 (88) 99.3 (99.8) 
Redundancy (%) 4.0 (3.1) 4.11 (4.19) 
Solvent content (%) 69 65 
Refinement   
Reflections(total/unique) 328,583/81,493 254,780/61,864 
Rworkd/Rfreee 0.197/0.225 0.231/0.264 
Ramachandran statisticsf (favored/allowed/outliers) 95.9/3.8/0.3 94.7/5.1/0.2 
MolProbity scoref (%) 1.54 (100%) 1.67 (100%) 
Clash scoref (%) 4.90 (100%) 5.8 (100%) 
Root mean square deviations   
Bond lengths (Å) 0.005 0.005 
Bond angles (°) 0.773 0.783 
PDB ID no. 4NEH 4NEN 
Crystal Native Dehydrated 
Data collection   
Space group P212121 P212121 
Cell dimensions   
a, b, c (Å) 126.8, 131.4, 190.2 126.9, 119.8, 182.3 
α, β, γ (°) 90, 90, 90 90, 90, 90 
Resolution range (Å) 50.0–2.75 50–2.9 
CC1/2b 99.7 (13.4)a 98.7 (11.8)a 
Rmerge (%)c 11 (305.7) 26.5 (449.3) 
I/σ (I) 10 (0.4) 7.96 (0.35) 
Completeness (%) 98 (88) 99.3 (99.8) 
Redundancy (%) 4.0 (3.1) 4.11 (4.19) 
Solvent content (%) 69 65 
Refinement   
Reflections(total/unique) 328,583/81,493 254,780/61,864 
Rworkd/Rfreee 0.197/0.225 0.231/0.264 
Ramachandran statisticsf (favored/allowed/outliers) 95.9/3.8/0.3 94.7/5.1/0.2 
MolProbity scoref (%) 1.54 (100%) 1.67 (100%) 
Clash scoref (%) 4.90 (100%) 5.8 (100%) 
Root mean square deviations   
Bond lengths (Å) 0.005 0.005 
Bond angles (°) 0.773 0.783 
PDB ID no. 4NEH 4NEN 
a

Numbers in parentheses correspond to the outermost resolution shell.

b

CC1/2 = Pearson’s correlation coefficient between average intensities of random half data sets for each unique reflection (Karplus and Diederichs, 2012).

c

Rmerge = ΣhklΣi|Ii(hkl) − <Ī(hkl)>|/ΣhklΣiIi(hkl), where Ii(hkl) and <Ī(hkl)> are the i and mean measurement of the intensity of reflection hkl.

d

Rwork = Σhkl||Fobs(hkl)| − |Fcalc(hkl)||/Σhkl|Fobs(hkl)|, where Fobs(hkl) and Fcalc(hkl) are the observed and calculated structure factors, respectively. No I/σ(I) cutoff was applied.

e

Rfree is the R value obtained for a test set of reflections consisting of a randomly selected ∼5% subset of the data set excluded from refinement.

f

Reported by MOLPROBITY (Davis et al., 2007).

or Create an Account

Close Modal
Close Modal