Deviations versus genome mean (p-value, one sided Student’s t-test)
| Zone type | As | Ts | Gs | Cs | CG | GC | CC | GG | GC or CG | TA | AT | AA | TT | AT or TA |
| All pre-RC | 0.23 | 3.5 × 10−9 | 3.6 × 10−6 | 0.07 | 0.01 | 1.1 × 10−4 | 1.2 × 10−3 | 2.2 × 10−9 | 1.9 × 10−4 | 0.13 | 0.06 | 0.22 | 2.7 × 10−3 | 0.05 |
| Top-pre-RC | 0.46 | 0.21 | 0.16 | 0.40 | 0.26 | 0.38 | 0.33 | 0.01 | 0.44 | 0.47 | 0.34 | 0.44 | 0.26 | 0.39 |
| Bot-pre-RC | 2.6 × 10−3 | 2.9 × 10−4 | 2.9 × 10−7 | 0.18 | 2.5 × 10−5 | 1.6 × 10−3 | 0.02 | 4.0 × 10−8 | 5.0 × 10−5 | 0.15 | 0.04 | 0.01 | 0.02 | 0.05 |
| All SNS | 1.8 × 10−7 | 4.5 × 10−8 | 3.4 × 10−6 | 8.2 × 10−8 | 2 × 10−12 | 1.2 × 10−9 | 1.4 × 10−5 | 2.3 × 10−7 | 5 × 10−14 | 1.7 × 10−6 | 3.8 × 10−6 | 2.4 × 10−5 | 1.4 × 10−5 | 5.8 × 10−8 |
| TopSNS | 6.0 × 10−4 | 3.5 × 10−5 | 4.0 × 10−4 | 4.4 × 10−4 | 3.0 × 10−7 | 4.2 × 10−6 | 0.03 | 1.8 × 10−5 | 2.8 × 10−8 | 1.8 × 10−4 | 1.1 × 10−4 | 0.01 | 1.8 × 10−5 | 1.1 × 10−5 |
| BotSNS | 0.02 | 0.07 | 0.27 | 1.7 × 10−3 | 0.01 | 0.04 | 5.1 × 10−4 | 0.08 | 0.01 | 0.38 | 0.09 | 0.02 | 0.28 | 0.24 |
| Zone type | As | Ts | Gs | Cs | CG | GC | CC | GG | GC or CG | TA | AT | AA | TT | AT or TA |
| All pre-RC | 0.23 | 3.5 × 10−9 | 3.6 × 10−6 | 0.07 | 0.01 | 1.1 × 10−4 | 1.2 × 10−3 | 2.2 × 10−9 | 1.9 × 10−4 | 0.13 | 0.06 | 0.22 | 2.7 × 10−3 | 0.05 |
| Top-pre-RC | 0.46 | 0.21 | 0.16 | 0.40 | 0.26 | 0.38 | 0.33 | 0.01 | 0.44 | 0.47 | 0.34 | 0.44 | 0.26 | 0.39 |
| Bot-pre-RC | 2.6 × 10−3 | 2.9 × 10−4 | 2.9 × 10−7 | 0.18 | 2.5 × 10−5 | 1.6 × 10−3 | 0.02 | 4.0 × 10−8 | 5.0 × 10−5 | 0.15 | 0.04 | 0.01 | 0.02 | 0.05 |
| All SNS | 1.8 × 10−7 | 4.5 × 10−8 | 3.4 × 10−6 | 8.2 × 10−8 | 2 × 10−12 | 1.2 × 10−9 | 1.4 × 10−5 | 2.3 × 10−7 | 5 × 10−14 | 1.7 × 10−6 | 3.8 × 10−6 | 2.4 × 10−5 | 1.4 × 10−5 | 5.8 × 10−8 |
| TopSNS | 6.0 × 10−4 | 3.5 × 10−5 | 4.0 × 10−4 | 4.4 × 10−4 | 3.0 × 10−7 | 4.2 × 10−6 | 0.03 | 1.8 × 10−5 | 2.8 × 10−8 | 1.8 × 10−4 | 1.1 × 10−4 | 0.01 | 1.8 × 10−5 | 1.1 × 10−5 |
| BotSNS | 0.02 | 0.07 | 0.27 | 1.7 × 10−3 | 0.01 | 0.04 | 5.1 × 10−4 | 0.08 | 0.01 | 0.38 | 0.09 | 0.02 | 0.28 | 0.24 |
Nucleotide feature deviations between pre-RC or SNS zones in relation to the genome mean. The p-values shown indicate the significance of the deviation between each nucleotide feature in Table 2 and the genome mean.