Yeast strains used in this paper
| Name | Genotype | Reference |
| BY4742 | MATα his3Δ leu2Δ lys2Δ ura3Δ | Invitrogen |
| JGY134 | SEY6210 RFP-APE1::LEU2 ATG9-3xGFP::URA3 | This paper |
| JGY135 | SEY6210 RFP-APE1::LEU2 ATG9-3xGFP::URA3 atg1Δ::ble | This paper |
| KDM1003 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 mkk1Δ::HIS5 mkk2Δ::KAN | This paper |
| KDM1005 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 pbs2Δ::KAN | This paper |
| KDM1008 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 slt2Δ::KAN | This paper |
| KDM1015 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 hog1Δ::HIS5 | This paper |
| KDM1021 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 ssk1Δ::ble | This paper |
| KDM1022 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 sho1Δ::ble | This paper |
| KDM1023 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 wsc1Δ::ble | This paper |
| KDM1025 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 slt2Δ::KAN hog1Δ::HIS5 | This paper |
| KDM1101 | SEY6210 PEX14-GFP::KAN slt2Δ::URA3 | This paper |
| KDM1102 | SEY6210 PEX14-GFP::KAN hog1Δ::URA3 | This paper |
| KDM1203 | SEY6210 atg1Δ::HIS5 slt2Δ::ble | This paper |
| KDM1207 | SEY6210 RFP-APE1::LEU2 ATG9-3xGFP::URA3 hog1Δ::KAN | This paper |
| KDM1211 | SEY6210 atg1Δ::HIS5 hog1Δ::ble | This paper |
| KDM1212 | SEY6210 RFP-APE1::LEU2 ATG9-3xGFP::URA3 atg1Δ::ble hog1Δ::KAN | This paper |
| KDM1213 | SEY6210 slt2Δ::HIS5 | This paper |
| KDM1214 | SEY6210 hog1Δ::HIS5 | This paper |
| KDM1217 | SEY6210 HOG1-GFP::HIS5 | This paper |
| KDM1218 | SEY6210 SLT2-GFP::HIS5 | This paper |
| KDM1303 | SEY6210 OM45-GFP::TRP1 mkk2Δ::KAN mkk1Δ::HIS5 | This paper |
| KDM1305 | SEY6210 OM45-GFP::TRP1 slt2Δ::KAN | This paper |
| KDM1307 | SEY6210 OM45-GFP::TRP1 hog1Δ::KAN | This paper |
| KDM1309 | SEY6210 OM45-GFP::TRP1 pbs2Δ::KAN | This paper |
| KDM1403 | SEY6210 pho13Δ pho8Δ60::HIS3 hog1Δ::KAN | This paper |
| KDM1401 | SEY6210 pho13Δ pho8Δ60::HIS3 slt2Δ::URA3 | This paper |
| KDM2009 | BY4742 OM45-GFP::HIS3 pkc1-2::KAN | This paper |
| KDM2011 | BY4742 OM45-GFP::HIS3 pkc1-1::KAN | This paper |
| KDM2010 | BY4742 OM45-GFP::HIS3 pkc1-3::KAN | This paper |
| KDM2012 | BY4742 OM45-GFP::HIS3 pkc1-4::KAN | This paper |
| KDM2023 | BY4742 OM45-GFP::HIS3 | This paper |
| KDM2024 | BY4742 OM45-GFP::HIS3 wsc1Δ::KAN | This paper |
| KDM2025 | BY4742 OM45-GFP::HIS3 wsc2Δ::KAN | This paper |
| KDM2026 | BY4742 OM45-GFP::HIS3 wsc3Δ::KAN | This paper |
| KDM2027 | BY4742 OM45-GFP::HIS3 wsc4Δ::KAN | This paper |
| KDM2028 | BY4742 OM45-GFP::HIS3 mid2Δ::KAN | This paper |
| KDM2029 | BY4742 OM45-GFP::HIS3 mtl1Δ::KAN | This paper |
| KDM2030 | BY4742 OM45-GFP::HIS3 rlm1Δ::KAN | This paper |
| KDM2031 | BY4742 OM45-GFP::HIS3 swi4Δ::KAN | This paper |
| KDM2032 | BY4742 OM45-GFP::HIS3 swi6Δ::KAN | This paper |
| KDM2033 | BY4742 OM45-GFP::HIS3 sko1Δ::KAN | This paper |
| KDM2034 | BY4742 OM45-GFP::HIS3 smp1Δ::KAN | This paper |
| KDM2035 | BY4742 OM45-GFP::HIS3 hot1Δ::KAN | This paper |
| KDM2036 | BY4742 OM45-GFP::HIS3 sln1-ts::KAN | This paper |
| KWY20 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 | (Kanki et al., 2009a) |
| KWY22 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 atg32Δ::KAN | (Kanki et al., 2009a) |
| KWY33 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 bck1Δ::KAN | (Kanki et al., 2009a) |
| KWY51 | SEY6210 OM45-GFP::TRP1 bck1Δ::KAN | (Kanki et al., 2009a) |
| SEY6210 | MATα ura3-52 leu2-3,112 his3-Δ200 trp1-Δ901 lys2-801 suc2-Δ9 mel GAL | (Robinson et al., 1988) |
| TKYM130 | SEY6210 OM45-GFP::TRP1 atg32Δ::URA3 | (Kanki et al., 2009b) |
| TKYM22 | SEY6210 OM45-GFP::TRP1 | (Kanki and Klionsky, 2008) |
| TKYM67 | SEY6210 PEX14-GFP::KAN | (Kanki and Klionsky, 2008) |
| TKYM72 | SEY6210 PEX14-GFP::KAN atg1Δ::HIS5 | (Kanki and Klionsky, 2008) |
| TKYM203 | SEY6210 atg1Δ::HIS5 IDH1-RFP::KAN | (Kanki et al., 2009b) |
| UNY29 | SEY6210 atg13Δ::KAN atg1Δ::HIS5 | This paper |
| WHY001 | SEY6210 atg1Δ::HIS5 | (Shintani et al., 2002) |
| WLY176 | SEY6210 pho13Δ pho8Δ60::HIS3 | (Kanki et al., 2009a) |
| WLY192 | SEY6210 pho13Δ::KAN pho8Δ60::URA3 atg1Δ::HIS5 | (Kanki et al., 2009a) |
| Name | Genotype | Reference |
| BY4742 | MATα his3Δ leu2Δ lys2Δ ura3Δ | Invitrogen |
| JGY134 | SEY6210 RFP-APE1::LEU2 ATG9-3xGFP::URA3 | This paper |
| JGY135 | SEY6210 RFP-APE1::LEU2 ATG9-3xGFP::URA3 atg1Δ::ble | This paper |
| KDM1003 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 mkk1Δ::HIS5 mkk2Δ::KAN | This paper |
| KDM1005 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 pbs2Δ::KAN | This paper |
| KDM1008 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 slt2Δ::KAN | This paper |
| KDM1015 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 hog1Δ::HIS5 | This paper |
| KDM1021 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 ssk1Δ::ble | This paper |
| KDM1022 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 sho1Δ::ble | This paper |
| KDM1023 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 wsc1Δ::ble | This paper |
| KDM1025 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 slt2Δ::KAN hog1Δ::HIS5 | This paper |
| KDM1101 | SEY6210 PEX14-GFP::KAN slt2Δ::URA3 | This paper |
| KDM1102 | SEY6210 PEX14-GFP::KAN hog1Δ::URA3 | This paper |
| KDM1203 | SEY6210 atg1Δ::HIS5 slt2Δ::ble | This paper |
| KDM1207 | SEY6210 RFP-APE1::LEU2 ATG9-3xGFP::URA3 hog1Δ::KAN | This paper |
| KDM1211 | SEY6210 atg1Δ::HIS5 hog1Δ::ble | This paper |
| KDM1212 | SEY6210 RFP-APE1::LEU2 ATG9-3xGFP::URA3 atg1Δ::ble hog1Δ::KAN | This paper |
| KDM1213 | SEY6210 slt2Δ::HIS5 | This paper |
| KDM1214 | SEY6210 hog1Δ::HIS5 | This paper |
| KDM1217 | SEY6210 HOG1-GFP::HIS5 | This paper |
| KDM1218 | SEY6210 SLT2-GFP::HIS5 | This paper |
| KDM1303 | SEY6210 OM45-GFP::TRP1 mkk2Δ::KAN mkk1Δ::HIS5 | This paper |
| KDM1305 | SEY6210 OM45-GFP::TRP1 slt2Δ::KAN | This paper |
| KDM1307 | SEY6210 OM45-GFP::TRP1 hog1Δ::KAN | This paper |
| KDM1309 | SEY6210 OM45-GFP::TRP1 pbs2Δ::KAN | This paper |
| KDM1403 | SEY6210 pho13Δ pho8Δ60::HIS3 hog1Δ::KAN | This paper |
| KDM1401 | SEY6210 pho13Δ pho8Δ60::HIS3 slt2Δ::URA3 | This paper |
| KDM2009 | BY4742 OM45-GFP::HIS3 pkc1-2::KAN | This paper |
| KDM2011 | BY4742 OM45-GFP::HIS3 pkc1-1::KAN | This paper |
| KDM2010 | BY4742 OM45-GFP::HIS3 pkc1-3::KAN | This paper |
| KDM2012 | BY4742 OM45-GFP::HIS3 pkc1-4::KAN | This paper |
| KDM2023 | BY4742 OM45-GFP::HIS3 | This paper |
| KDM2024 | BY4742 OM45-GFP::HIS3 wsc1Δ::KAN | This paper |
| KDM2025 | BY4742 OM45-GFP::HIS3 wsc2Δ::KAN | This paper |
| KDM2026 | BY4742 OM45-GFP::HIS3 wsc3Δ::KAN | This paper |
| KDM2027 | BY4742 OM45-GFP::HIS3 wsc4Δ::KAN | This paper |
| KDM2028 | BY4742 OM45-GFP::HIS3 mid2Δ::KAN | This paper |
| KDM2029 | BY4742 OM45-GFP::HIS3 mtl1Δ::KAN | This paper |
| KDM2030 | BY4742 OM45-GFP::HIS3 rlm1Δ::KAN | This paper |
| KDM2031 | BY4742 OM45-GFP::HIS3 swi4Δ::KAN | This paper |
| KDM2032 | BY4742 OM45-GFP::HIS3 swi6Δ::KAN | This paper |
| KDM2033 | BY4742 OM45-GFP::HIS3 sko1Δ::KAN | This paper |
| KDM2034 | BY4742 OM45-GFP::HIS3 smp1Δ::KAN | This paper |
| KDM2035 | BY4742 OM45-GFP::HIS3 hot1Δ::KAN | This paper |
| KDM2036 | BY4742 OM45-GFP::HIS3 sln1-ts::KAN | This paper |
| KWY20 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 | (Kanki et al., 2009a) |
| KWY22 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 atg32Δ::KAN | (Kanki et al., 2009a) |
| KWY33 | SEY6210 pho8Δ::TRP1 pho13Δ::LEU2 pRS406-ADH1-COX4-pho8Δ60 bck1Δ::KAN | (Kanki et al., 2009a) |
| KWY51 | SEY6210 OM45-GFP::TRP1 bck1Δ::KAN | (Kanki et al., 2009a) |
| SEY6210 | MATα ura3-52 leu2-3,112 his3-Δ200 trp1-Δ901 lys2-801 suc2-Δ9 mel GAL | (Robinson et al., 1988) |
| TKYM130 | SEY6210 OM45-GFP::TRP1 atg32Δ::URA3 | (Kanki et al., 2009b) |
| TKYM22 | SEY6210 OM45-GFP::TRP1 | (Kanki and Klionsky, 2008) |
| TKYM67 | SEY6210 PEX14-GFP::KAN | (Kanki and Klionsky, 2008) |
| TKYM72 | SEY6210 PEX14-GFP::KAN atg1Δ::HIS5 | (Kanki and Klionsky, 2008) |
| TKYM203 | SEY6210 atg1Δ::HIS5 IDH1-RFP::KAN | (Kanki et al., 2009b) |
| UNY29 | SEY6210 atg13Δ::KAN atg1Δ::HIS5 | This paper |
| WHY001 | SEY6210 atg1Δ::HIS5 | (Shintani et al., 2002) |
| WLY176 | SEY6210 pho13Δ pho8Δ60::HIS3 | (Kanki et al., 2009a) |
| WLY192 | SEY6210 pho13Δ::KAN pho8Δ60::URA3 atg1Δ::HIS5 | (Kanki et al., 2009a) |