Rockefeller University Press

Table I.

Nucleoporins containing β-propeller domains

Nucleoporin	Residues	References
Nup107-160 complex
Nup133	76–478
Nup160 (yNup120)		Devos et al., 2004
Sec13^{^b}		Cronshaw et al., 2002
Seh1^{^b}		Cronshaw et al., 2002
Nup37^{^b}^,^{^c}		Cronshaw et al., 2002
Nup43^{^b}^,^{^c}		Cronshaw et al., 2002
Nup214 complex
Nup214 (yNup159)^{^a}	1–455
Nup88 (yNup82)^{^a}	50–550
Other
Aladin^{^b}^,^{^c}		Cronshaw et al., 2002
Nup155 (yNup170)^{^a}	50–550

Nucleoporin	Residues	References
Nup107-160 complex
Nup133	76–478
Nup160 (yNup120)		Devos et al., 2004
Sec13^{^b}		Cronshaw et al., 2002
Seh1^{^b}		Cronshaw et al., 2002
Nup37^{^b}^,^{^c}		Cronshaw et al., 2002
Nup43^{^b}^,^{^c}		Cronshaw et al., 2002
Nup214 complex
Nup214 (yNup159)^{^a}	1–455
Nup88 (yNup82)^{^a}	50–550
Other
Aladin^{^b}^,^{^c}		Cronshaw et al., 2002
Nup155 (yNup170)^{^a}	50–550

^a

400–500-residue domains predicted to contain mostly β-sheet structure were submitted to the SAM-T02 server (HMM based; http://www.cse.ucsc.edu/research/compbio/HMM-apps/T02-query.html) and Fugue Server (environment specific score matrices; http://www-cryst.bioc.cam.ac.uk/~fugue/prfsearch.html) for fold prediction.

^b

WD-repeat protein.

^c

No yeast homologue identified.