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Journal Articles

Transcriptional network dynamics in early T cell development

In Special Collection:
Autoimmunity 2024 , Immunity Review Series
Boyoung Shin, Samantha J. Chang, Brendan W. MacNabb, Ellen V. Rothenberg
Journal: Journal of Experimental Medicine
Series: Thymus and T Cell Development Focus
J Exp Med (2024) 221 (10): e20230893.
https://doi.org/10.1084/jem.20230893
Published: 21 August 2024
View article titled, Transcriptional network dynamics in early T cell development
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Journal Articles

Loss of ARID3A perturbs intestinal epithelial proliferation–differentiation ratio and regeneration

Nikolaos Angelis, Anna Baulies, Florian Hubl, Anna Kucharska, Gavin Kelly, Miriam Llorian, Stefan Boeing, Vivian S.W. Li
Journal: Journal of Experimental Medicine
J Exp Med (2024) 221 (10): e20232279.
https://doi.org/10.1084/jem.20232279
Published: 16 August 2024
View article titled, Loss of ARID3A perturbs intestinal epithelial proliferation–differentiation ratio and regeneration
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Includes: Supplementary data
Journal Articles

Generation and repair of thymic epithelial cells

In Special Collection:
Autoimmunity 2024
Graham Anderson, Emilie J. Cosway, Kieran D. James, Izumi Ohigashi, Yousuke Takahama
Journal: Journal of Experimental Medicine
Series: Thymus and T Cell Development Focus
J Exp Med (2024) 221 (10): e20230894.
https://doi.org/10.1084/jem.20230894
Published: 09 July 2024
View article titled, Generation and repair of thymic epithelial cells
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Journal Articles

Treg–tissue cell interactions in repair and regeneration

In Special Collection:
Immunity Review Series , JEM Mucosal Immunology 2024
Lucas F. Loffredo, Thomas M. Savage, Olivia R. Ringham, Nicholas Arpaia
Journal: Journal of Experimental Medicine
J Exp Med (2024) 221 (6): e20231244.
https://doi.org/10.1084/jem.20231244
Published: 26 April 2024
View article titled, Treg–tissue cell interactions in repair and regeneration
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Journal Articles

Cellular senescence: Neither irreversible nor reversible

In Special Collection:
Myeloid Stem Cells and Leukemia 2024
Maurice Reimann, Soyoung Lee, Clemens A. Schmitt
Journal: Journal of Experimental Medicine
J Exp Med (2024) 221 (4): e20232136.
https://doi.org/10.1084/jem.20232136
Published: 22 February 2024
View article titled, Cellular senescence: Neither irreversible nor reversible
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Journal Articles

Twisted: Escape of epitope-edited healthy cells from immune attack

Laura Volta, Markus G. Manz
Journal: Journal of Experimental Medicine
J Exp Med (2023) 220 (12): e20231635.
https://doi.org/10.1084/jem.20231635
Published: 11 October 2023
View article titled, Twisted: Escape of epitope-edited healthy cells from immune attack
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Journal Articles

Epitope-engineered human hematopoietic stem cells are shielded from CD123-targeted immunotherapy

In Special Collection:
JEM Cancer Collection 2024 , Cancer Immunotherapy Update 2024
Romina Marone, Emmanuelle Landmann, Anna Devaux, Rosalba Lepore, Denis Seyres, Jessica Zuin, Thomas Burgold, Corinne Engdahl, Giuseppina Capoferri, Alessandro Dell’Aglio, Clément Larrue, Federico Simonetta, Julia Rositzka, Manuel Rhiel, Geoffroy Andrieux, Danielle N. Gallagher, Markus S. Schröder, Amélie Wiederkehr, Alessandro Sinopoli, Valentin Do Sacramento, Anna Haydn, Laura Garcia-Prat, Christopher Divsalar, Anna Camus, Liwen Xu, Lorenza Bordoli, Torsten Schwede, Matthew Porteus, Jérôme Tamburini, Jacob E. Corn, Toni Cathomen, Tatjana I. Cornu, Stefanie Urlinger, Lukas T. Jeker
Journal: Journal of Experimental Medicine
J Exp Med (2023) 220 (12): e20231235.
https://doi.org/10.1084/jem.20231235
Published: 29 September 2023
View article titled, Epitope-engineered human hematopoietic stem cells are shielded from CD123-targeted immunotherapy
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Includes: Supplementary data
Journal Articles

Identifying biomarkers of heterogeneity and transplantation efficacy in retinal pigment epithelial cells

Farhad Farjood, Justine D. Manos, Yue Wang, Anne L. Williams, Cuiping Zhao, Susan Borden, Nazia Alam, Glen Prusky, Sally Temple, Jeffrey H. Stern, Nathan C. Boles
Journal: Journal of Experimental Medicine
J Exp Med (2023) 220 (12): e20230913.
https://doi.org/10.1084/jem.20230913
Published: 20 September 2023
View article titled, Identifying biomarkers of heterogeneity and transplantation efficacy in retinal pigment epithelial cells
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Includes: Supplementary data
Journal Articles

Myofiber Baf60c controls muscle regeneration by modulating Dkk3-mediated paracrine signaling

Jingya Xu, Xiaofei Li, Wei Chen, Ziyin Zhang, Yanping Zhou, Yahui Gou, Cheng-an Lv, Lu Jin, Xinyuan Qiu, Shengshan Ma, Qing-Qian Wu, Tongyu Liu, Lin Mi, Zhuoying Yang, Ting Yu, Xiaowen Pan, Yu Feng, Pengfei Shan, Zhuo-Xian Meng
Journal: Journal of Experimental Medicine
J Exp Med (2023) 220 (9): e20221123.
https://doi.org/10.1084/jem.20221123
Published: 07 June 2023
View article titled, Myofiber Baf60c controls muscle regeneration by modulating Dkk3-mediated paracrine signaling
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Includes: Supplementary data
Journal Articles

Secretory MPP3 reinforce myeloid differentiation trajectory and amplify myeloid cell production

In Special Collection:
Hematology and Stem Cells 2023
Yoon-A Kang, Hyojung Paik, Si Yi Zhang, Jonathan J. Chen, Oakley C. Olson, Carl A. Mitchell, Amelie Collins, James W. Swann, Matthew R. Warr, Rong Fan, Emmanuelle Passegué
Journal: Journal of Experimental Medicine
J Exp Med (2023) 220 (8): e20230088.
https://doi.org/10.1084/jem.20230088
Published: 26 April 2023
View article titled, Secretory MPP3 reinforce myeloid differentiation trajectory and amplify myeloid cell production
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Includes: Supplementary data
Journal Articles

Fast and scarless: Prx1+ fibroblasts turbocharge healing

Rachel M. Kratofil, Shruti Naik
Journal: Journal of Experimental Medicine
J Exp Med (2023) 220 (3): e20222139.
https://doi.org/10.1084/jem.20222139
Published: 06 February 2023
View article titled, Fast and scarless: Prx1<sup>+</sup> fibroblasts turbocharge healing
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Journal Articles

Distinct fibroblast progenitor subpopulation expedites regenerative mucosal healing by immunomodulation

In Special Collection:
Fibrosis Collection 2023
Kang I. Ko, Brett P. DerGarabedian, Zhaoxu Chen, Rahul Debnath, Annette Ko, Brittany N. Link, Jonathan M. Korostoff, Dana T. Graves
Journal: Journal of Experimental Medicine
J Exp Med (2022) 220 (3): e20221350.
https://doi.org/10.1084/jem.20221350
Published: 30 December 2022
View article titled, Distinct fibroblast progenitor subpopulation expedites regenerative mucosal healing by immunomodulation
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Includes: Supplementary data
Journal Articles

Regulation of the alveolar regenerative niche by amphiregulin-producing regulatory T cells

In Special Collection:
Immunology Update Winter 2023 , Hematology and Stem Cells 2023
Katherine A. Kaiser, Lucas F. Loffredo, Kenia de los Santos-Alexis, Olivia R. Ringham, Nicholas Arpaia
Journal: Journal of Experimental Medicine
J Exp Med (2022) 220 (3): e20221462.
https://doi.org/10.1084/jem.20221462
Published: 19 December 2022
View article titled, Regulation of the alveolar regenerative niche by amphiregulin-producing regulatory T cells
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Includes: Supplementary data
Journal Articles

Inhibition of GABAA receptors in intestinal stem cells prevents chemoradiotherapy-induced intestinal toxicity

Cuiyu Zhang, Yuping Zhou, Junjie Zheng, Nannan Ning, Haining Liu, Wenyang Jiang, Xin Yu, Kun Mu, Yan Li, Wei Guo, Huili Hu, Jingxin Li, Dawei Chen
Journal: Journal of Experimental Medicine
J Exp Med (2022) 219 (12): e20220541.
https://doi.org/10.1084/jem.20220541
Published: 20 September 2022
View article titled, Inhibition of GABA<sub>A</sub> receptors in intestinal stem cells prevents chemoradiotherapy-induced intestinal toxicity
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Includes: Supplementary data
Journal Articles

c-MAF coordinates enterocyte zonation and nutrient uptake transcriptional programs

In Special Collection:
Metabolism Signaling
Alejandra González-Loyola, Jeremiah Bernier-Latmani, Irena Roci, Tania Wyss, Jakob Langer, Stephan Durot, Olivia Munoz, Borja Prat-Luri, Mauro Delorenzi, Matthias P. Lutolf, Nicola Zamboni, Grégory Verdeil, Tatiana V. Petrova
Journal: Journal of Experimental Medicine
J Exp Med (2022) 219 (12): e20212418.
https://doi.org/10.1084/jem.20212418
Published: 19 September 2022
View article titled, c-MAF coordinates enterocyte zonation and nutrient uptake transcriptional programs
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Includes: Supplementary data
Journal Articles

Transit-amplifying cells control R-spondins in the mouse crypt to modulate intestinal stem cell proliferation

Almudena Chaves-Pérez, Karla Santos-de-Frutos, Sergio de la Rosa, Irene Herranz-Montoya, Cristian Perna, Nabil Djouder
Journal: Journal of Experimental Medicine
J Exp Med (2022) 219 (11): e20212405.
https://doi.org/10.1084/jem.20212405
Published: 13 September 2022
View article titled, Transit-amplifying cells control R-spondins in the mouse crypt to modulate intestinal stem cell proliferation
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Includes: Supplementary data
Journal Articles

EBF1 primes B-lymphoid enhancers and limits the myeloid bias in murine multipotent progenitors

In Special Collection:
Hematology 2022
Aurelie Lenaerts, Iwo Kucinski, Ward Deboutte, Marta Derecka, Pierre Cauchy, Thomas Manke, Berthold Göttgens, Rudolf Grosschedl
Journal: Journal of Experimental Medicine
J Exp Med (2022) 219 (11): e20212437.
https://doi.org/10.1084/jem.20212437
Published: 01 September 2022
View article titled, EBF1 primes B-lymphoid enhancers and limits the myeloid bias in murine multipotent progenitors
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Includes: Supplementary data
Journal Articles

Helminths revive to survive

John R. Grainger, Rufus H. Daw
Journal: Journal of Experimental Medicine
J Exp Med (2022) 219 (9): e20221183.
https://doi.org/10.1084/jem.20221183
Published: 16 August 2022
View article titled, Helminths revive to survive
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Journal Articles

NF-κB signaling controls H3K9me3 levels at intronic LINE-1 and hematopoietic stem cell genes in cis

Yanis Pelinski, Donia Hidaoui, Anne Stolz, François Hermetet, Rabie Chelbi, M’boyba Khadija Diop, Amir M. Chioukh, Françoise Porteu, Emilie Elvira-Matelot
Journal: Journal of Experimental Medicine
J Exp Med (2022) 219 (8): e20211356.
https://doi.org/10.1084/jem.20211356
Published: 08 July 2022
View article titled, NF-κB signaling controls H3K9me3 levels at intronic LINE-1 and hematopoietic stem cell genes in cis
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Includes: Supplementary data
Journal Articles

IL-17A–producing γδT cells promote muscle regeneration in a microbiota-dependent manner

In Special Collection:
Cytokines Collection 2022 , Stem Cell Collection 2022
Alexander O. Mann, Bola S. Hanna, Andrés R. Muñoz-Rojas, Inga Sandrock, Immo Prinz, Christophe Benoist, Diane Mathis
Journal: Journal of Experimental Medicine
J Exp Med (2022) 219 (5): e20211504.
https://doi.org/10.1084/jem.20211504
Published: 05 April 2022
View article titled, IL-17A–producing γδT cells promote muscle regeneration in a microbiota-dependent manner
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