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Journal Articles

Early transcriptional effects of inflammatory cytokines reveal highly redundant cytokine networks

Juliana J. Lee, Liang Yang, Jonathan J. Kotzin, Dughan Ahimovic, Michael J. Bale, Peter A. Nigrovic, Steven Z. Josefowicz, Diane Mathis, Christophe Benoist, Immunological Genome Project Consortium

J Exp Med (2025) 222 (4): e20241207.

https://doi.org/10.1084/jem.20241207

Published: 28 January 2025

View article titled, Early transcriptional effects of inflammatory cytokines reveal highly redundant cytokine networks

Includes: Supplementary data

Journal Articles

Hnf4 activates mimetic-cell enhancers to recapitulate gut and liver development within the thymus

In Special Collection:

Thymus, T Cell Development, and Inborn Errors

Daniel A. Michelson, Chong Zuo, Michael Verzi, Christophe Benoist, Diane Mathis

J Exp Med (2023) 220 (10): e20230461.

https://doi.org/10.1084/jem.20230461

Published: 03 July 2023

View article titled, Hnf4 activates mimetic-cell enhancers to recapitulate gut and liver development within the thymus

Includes: Supplementary data

Journal Articles

The interweaved signatures of common-gamma-chain cytokines across immunologic lineages

In Special Collection:

Innate Lymphoid Cells & Unconventional T Cells

Alev Baysoy, Kumba Seddu, Tamara Salloum, Caleb A. Dawson, Juliana J. Lee, Liang Yang, Shani Gal-oz, Hadas Ner-Gaon, Julie Tellier, Alberto Millan, Alexander Sasse, Brian Brown, Lewis L. Lanier, Tal Shay, Stephen Nutt, Daniel Dwyer, Christophe Benoist, The Immunological Genome Project Consortium

J Exp Med (2023) 220 (7): e20222052.

https://doi.org/10.1084/jem.20222052

Published: 28 March 2023

View article titled, The interweaved signatures of common-gamma-chain cytokines across immunologic lineages

Includes: Supplementary data

Journal Articles

IL-17A–producing γδT cells promote muscle regeneration in a microbiota-dependent manner

In Special Collection:

Cytokines Collection 2022 , Stem Cell Collection 2022

Alexander O. Mann, Bola S. Hanna, Andrés R. Muñoz-Rojas, Inga Sandrock, Immo Prinz, Christophe Benoist, Diane Mathis

J Exp Med (2022) 219 (5): e20211504.

https://doi.org/10.1084/jem.20211504

Published: 05 April 2022

View article titled, IL-17A–producing γδT cells promote muscle regeneration in a microbiota-dependent manner

Journal Articles

Developmental and cellular age direct conversion of CD4⁺ T cells into RORγ⁺ or Helios⁺ colon Treg cells

Alvin Pratama, Alexandra Schnell, Diane Mathis, Christophe Benoist

J Exp Med (2019) 217 (1): e20190428.

https://doi.org/10.1084/jem.20190428

Published: 04 November 2019

View article titled, Developmental and cellular age direct conversion of CD4+ T cells into RORγ+ or Helios+ colon Treg cells

Includes: Supplementary data

Journal Articles

T cell anergy in perinatal mice is promoted by T reg cells and prevented by IL-33

In Special Collection:

From Tolerance to Autoimmunity

Jonatan Tuncel, Christophe Benoist, Diane Mathis

J Exp Med (2019) 216 (6): 1328–1344.

https://doi.org/10.1084/jem.20182002

Published: 15 April 2019

View article titled, T cell anergy in perinatal mice is promoted by T reg cells and prevented by IL-33

Includes: Supplementary data

Journal Articles

Regulatory T cells control NK cells in an insulitic lesion by depriving them of IL-2

Jonathan Sitrin, Aaron Ring, K. Christopher Garcia, Christophe Benoist, Diane Mathis

J Exp Med (2013) 210 (6): 1153–1165.

https://doi.org/10.1084/jem.20122248

Published: 06 May 2013

View article titled, Regulatory T cells control NK cells in an insulitic lesion by depriving them of IL-2

Includes: Supplementary data

Journal Articles

Thymic negative selection is functional in NOD mice

Michael Mingueneau, Wenyu Jiang, Markus Feuerer, Diane Mathis, Christophe Benoist

J Exp Med (2012) 209 (3): 623–637.

https://doi.org/10.1084/jem.20112593

Published: 13 February 2012

View article titled, Thymic negative selection is functional in NOD mice

Includes: Supplementary data

Journal Articles

Anti-CD3 therapy permits regulatory T cells to surmount T cell receptor–specified peripheral niche constraints

Junko Nishio, Markus Feuerer, Jamie Wong, Diane Mathis, Christophe Benoist

J Exp Med (2010) 207 (9): 1879–1889.

https://doi.org/10.1084/jem.20100205

Published: 02 August 2010

View article titled, Anti-CD3 therapy permits regulatory T cells to surmount T cell receptor–specified peripheral niche constraints

Includes: Supplementary data

Journal Articles

Neonatal tolerance revisited: a perinatal window for Aire control of autoimmunity

Mireia Guerau-de-Arellano, Marianne Martinic, Christophe Benoist, Diane Mathis

J Exp Med (2009) 206 (6): 1245–1252.

https://doi.org/10.1084/jem.20090300

Published: 01 June 2009

View article titled, Neonatal tolerance revisited: a perinatal window for Aire control of autoimmunity

Includes: Supplementary data

Journal Articles

The AKT–mTOR axis regulates de novo differentiation of CD4⁺Foxp3⁺ cells

Sokol Haxhinasto, Diane Mathis, Christophe Benoist

J Exp Med (2008) 205 (3): 565–574.

https://doi.org/10.1084/jem.20071477

Published: 18 February 2008

View article titled, The AKT–mTOR axis regulates de novo differentiation of CD4+Foxp3+ cells

Includes: Supplementary data

Journal Articles

Proliferative arrest and rapid turnover of thymic epithelial cells expressing Aire

Daniel Gray, Jakub Abramson, Christophe Benoist, Diane Mathis

J Exp Med (2007) 204 (11): 2521–2528.

https://doi.org/10.1084/jem.20070795

Published: 01 October 2007

View article titled, Proliferative arrest and rapid turnover of thymic epithelial cells expressing Aire

Journal Articles

TCR-based lineage tracing: no evidence for conversion of conventional into regulatory T cells in response to a natural self-antigen in pancreatic islets

Jamie Wong, Diane Mathis, Christophe Benoist

J Exp Med (2007) 204 (9): 2039–2045.

https://doi.org/10.1084/jem.20070822

Published: 27 August 2007

View article titled, TCR-based lineage tracing: no evidence for conversion of conventional into regulatory T cells in response to a natural self-antigen in pancreatic islets

Includes: Supplementary data

Journal Articles

Inflammatory arthritis can be reined in by CpG-induced DC–NK cell cross talk

Hsin-Jung Wu, Heloisa Sawaya, Bryce Binstadt, Margot Brickelmaier, Amanda Blasius, Leonid Gorelik, Umar Mahmood, Ralph Weissleder, John Carulli, Christophe Benoist, Diane Mathis

J Exp Med (2007) 204 (8): 1911–1922.

https://doi.org/10.1084/jem.20070285

Published: 23 July 2007

View article titled, Inflammatory arthritis can be reined in by CpG-induced DC–NK cell cross talk

Includes: Supplementary data

Journal Articles

Lack of Foxp3 function and expression in the thymic epithelium

Adrian Liston, Andrew G. Farr, Zhibin Chen, Christophe Benoist, Diane Mathis, Nancy R. Manley, Alexander Y. Rudensky

J Exp Med (2007) 204 (3): 475–480.

https://doi.org/10.1084/jem.20062465

Published: 12 March 2007

View article titled, Lack of Foxp3 function and expression in the thymic epithelium

Includes: Supplementary data

Journal Articles

Where CD4⁺CD25⁺ T reg cells impinge on autoimmune diabetes

Zhibin Chen, Ann E. Herman, Michael Matos, Diane Mathis, Christophe Benoist

J Exp Med (2005) 202 (10): 1387–1397.

https://doi.org/10.1084/jem.20051409

Published: 21 November 2005

View article titled, Where CD4 + CD25 + T reg cells impinge on autoimmune diabetes

Includes: Supplementary data

Journal Articles

Modifier loci condition autoimmunity provoked by Aire deficiency

Wenyu Jiang, Mark S. Anderson, Roderick Bronson, Diane Mathis, Christophe Benoist

J Exp Med (2005) 202 (6): 805–815.

https://doi.org/10.1084/jem.20050693

Published: 19 September 2005

View article titled, Modifier loci condition autoimmunity provoked by Aire deficiency

Includes: Supplementary data

Journal Articles

Antigen persistence is required throughout the expansion phase of a CD4⁺ T cell response

Reinhard Obst, Hisse-Martien van Santen, Diane Mathis, Christophe Benoist

J Exp Med (2005) 201 (10): 1555–1565.

https://doi.org/10.1084/jem.20042521

Published: 16 May 2005

View article titled, Antigen persistence is required throughout the expansion phase of a CD4+ T cell response

Journal Articles

Number of T Reg Cells That Differentiate Does Not Increase upon Encounter of Agonist Ligand on Thymic Epithelial Cells

Hisse-Martien van Santen, Christophe Benoist, Diane Mathis

J Exp Med (2004) 200 (10): 1221–1230.

https://doi.org/10.1084/jem.20041022

Published: 08 November 2004

View article titled, Number of T Reg Cells That Differentiate Does Not Increase upon Encounter of Agonist Ligand on Thymic Epithelial Cells

Journal Articles

CD4⁺CD25⁺ T Regulatory Cells Dependent on ICOS Promote Regulation of Effector Cells in the Prediabetic Lesion

Ann E. Herman, Gordon J. Freeman, Diane Mathis, Christophe Benoist

J Exp Med (2004) 199 (11): 1479–1489.

https://doi.org/10.1084/jem.20040179

Published: 07 June 2004

View article titled, CD4+CD25+ T Regulatory Cells Dependent on ICOS Promote Regulation of Effector Cells in the Prediabetic Lesion

Includes: Supplementary data

NARROW

Early transcriptional effects of inflammatory cytokines reveal highly redundant cytokine networks

Hnf4 activates mimetic-cell enhancers to recapitulate gut and liver development within the thymus

The interweaved signatures of common-gamma-chain cytokines across immunologic lineages

IL-17A–producing γδT cells promote muscle regeneration in a microbiota-dependent manner

Developmental and cellular age direct conversion of CD4⁺ T cells into RORγ⁺ or Helios⁺ colon Treg cells

T cell anergy in perinatal mice is promoted by T reg cells and prevented by IL-33

Regulatory T cells control NK cells in an insulitic lesion by depriving them of IL-2

Thymic negative selection is functional in NOD mice

Anti-CD3 therapy permits regulatory T cells to surmount T cell receptor–specified peripheral niche constraints

Neonatal tolerance revisited: a perinatal window for Aire control of autoimmunity

The AKT–mTOR axis regulates de novo differentiation of CD4⁺Foxp3⁺ cells

Proliferative arrest and rapid turnover of thymic epithelial cells expressing Aire

TCR-based lineage tracing: no evidence for conversion of conventional into regulatory T cells in response to a natural self-antigen in pancreatic islets

Inflammatory arthritis can be reined in by CpG-induced DC–NK cell cross talk

Lack of Foxp3 function and expression in the thymic epithelium

Where CD4⁺CD25⁺ T reg cells impinge on autoimmune diabetes

Modifier loci condition autoimmunity provoked by Aire deficiency

Antigen persistence is required throughout the expansion phase of a CD4⁺ T cell response

Number of T Reg Cells That Differentiate Does Not Increase upon Encounter of Agonist Ligand on Thymic Epithelial Cells

CD4⁺CD25⁺ T Regulatory Cells Dependent on ICOS Promote Regulation of Effector Cells in the Prediabetic Lesion

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